Amycolatopsis sp. AA4: CU254_39295
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Entry
CU254_39295 CDS
T05278
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CU254_39295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_39295
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CU254_39295
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
ABC_tran
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
ATY15767
UniProt:
A0A2K8M550
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Position
8473130..8474284
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AA seq
384 aa
AA seq
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MYLRHLQVTDFRSWPLADLALEPGPVVLVGQNGRGKTNLLEAIGYVATLGSHRVATDAPL
VRHGCERALVRVAVVNEDRELTVELEITPGRANRARVNRGAVGKPRDVLGILRTVLFSPE
DLSLVRGDPSERRRFMDELLVLRAPRYAGVRADYEKVLKQRNALLKTAGKRRTGREDPYA
LSTLDVWDDHLSVAGAQLLAARLNLIADLAPYTADAYMGVAPDSRPAKIAYKSSLGEALP
PSYGVPGGERAEPEVLRELLLKALADTRRQELERGISLVGPHRDELELILGEAPAKGYAS
HGESWSFALALRLGSYELLRAEAGEPVLLLDDVFAELDRKRRARLAEVAAGAEQVLITAA
VAEDVPTELAGARFTVADGEVNRA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgtatctgcgacatctccaggtcaccgacttccggtcctggccgctggccgacctcgcc
ctcgaaccggggccggtcgtgctcgtcggccagaacggccgggggaagacgaacctgctc
gaagcgatcggctacgtggcgaccctcggttcgcaccgggtcgccacggacgccccgctc
gtccgccacggctgtgagcgcgcgctcgtccgggtcgcggtcgtcaacgaagaccgcgag
ctgacggtcgaactcgagatcacgcccggccgcgccaaccgtgcccgcgtgaatcgcggc
gcggtcggcaagccgcgggacgtgctcggcattctgcgtacggtgctgttctctccggag
gacctctcgctggtgcgcggcgacccgagcgaacgccgtcggttcatggacgaactgctc
gtgcttcgcgcgcctcggtacgcaggcgtgcgcgcggactacgagaaggtgcttaagcag
cgcaacgcgcttctcaagaccgcgggcaaacgacgtactggccgcgaagacccgtacgcg
ctgtcgacgctcgacgtgtgggacgaccatctctcggtggctggcgcgcagttgctggcg
gcacggttgaacctcatcgcggacctcgcgccgtacacggctgacgcttatatgggagtc
gcgcctgactctcgtccggcgaagatcgcgtacaagtcttcgctcggcgaagcgcttccg
ccgtcgtacggagtgcctggcggcgagcgggccgagccggaggtactgcgcgagctgttg
ctgaaggcgctggctgacacgcggcggcaggaactggagcgagggatcagtctcgtcggc
ccgcatcgggacgaattggagctgatcctcggcgaggcgccggcgaagggatacgcgagt
cacggcgagtcgtggtcgttcgcgctcgcgttgcggctcggaagttacgaacttctgcgt
gccgaagcgggcgaaccggtcttgttgctggacgatgtgttcgccgaactcgaccgcaag
cgccgggcccggctggccgaggtcgccgcgggcgccgaacaggtgctcatcaccgcggcg
gtggccgaggacgtgcccaccgagctcgccggagcgaggttcacggtggccgacggggag
gtgaaccgtgcctga
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