Amycolatopsis sp. AA4: CU254_39305
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Entry
CU254_39305 CDS
T05278
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyc03032
]
CU254_39305 (gyrB)
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_39305 (gyrB)
Enzymes [BR:
amyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CU254_39305 (gyrB)
DNA replication proteins [BR:
amyc03032
]
Prokaryotic type
DNA Topoisomerases
CU254_39305 (gyrB)
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CU254_39305 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ATY15769
LinkDB
All DBs
Position
8475227..8477194
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AA seq
655 aa
AA seq
DB search
MTENKSEYNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGYATK
VEVTLLADGGVRVVDDGRGIPVDIHPKEKKPTLEVVLTILHAGGKFDSDSYAVSGGLHGV
GVSVVNALSTKLLAEIKVGGRSWRQEYLNQVPGPLEDLGPATDTGTTITFWADGDIFETT
TYNFETISRRLQEMAFLNKGLTLSLRDERVADEETEEDAAGKQARVKEVVYCYPGGLEDF
VKHINGSKDPIHESVISFDAKGSGLEVEVAMQWNTGFTPSVYTFANTINTHEGGTHEEGF
RAALTRVVNAYAREKKLLKEKDANLTGDDVREGLAAIVSIKLAEPQFEGQTKTKLGNSEA
KTFVQQQSNEWLGDWFERNPSEAKTIINKSISSAQARLAARKARDLVRRKGALEIGGLPG
KLKDCRSNDPGECELYIVEGDSAGGSAKEGRDSMYQAILPIRGKIINVEKARIDRVLKNT
EVQSLITALGTGIHDDFDISKLRYHKIVLMADADVDGQHITTLLLTLLFRFMTPLIEHGH
VFLSRPPLYKIKWPRSEPEYAYSDKERDAVIQAGVEAGRRLPKDDAIQRYKGLGEMNAEE
LWETTMDPANRLLGQVTLDDAAQADELFSVLMGEDVEARRSFITRNAKDVRFLDV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagaacaagagcgagtacaacgcgtcgtccatcaccgtgctcgaaggcctcgaa
gcagttcgcaagcgccccggcatgtacatcggttccaccggtgagcgcggtctccaccac
ctggtccaggaggtggtggacaactccgtggacgaggcgatggcggggtacgccaccaag
gtcgaggttaccctgctcgcggacggcggggtgcgcgtcgtcgacgacggccgcgggatc
ccggtcgacatccaccccaaggagaagaagccgacgctcgaggtcgtgctcaccatcctg
cacgcgggcggcaagttcgacagcgactcctacgcggtgtccggcggtctgcacggcgtc
ggcgtctccgtggtgaacgcgctgtccacgaagctgctcgcggagatcaaggtcggcggc
cgcagctggcgccaggagtacctcaaccaggtcccgggcccgctcgaggacctcggcccg
gccaccgacaccggcaccaccatcacgttctgggccgacggcgacatcttcgagaccacc
acctacaacttcgagaccatctcgcgccgcctgcaggagatggcgttcctcaacaagggc
ctcaccctgtcgctgcgcgacgagcgcgtcgccgacgaggagaccgaagaggacgccgcg
ggcaagcaggccagggtcaaggaagtcgtctactgctacccgggcgggctcgaggacttc
gtcaagcacatcaacggcagcaaggacccgatccacgagagcgtcatctccttcgacgcc
aagggctccggcctcgaggtcgaggtcgcgatgcagtggaacaccgggttcacgccgtcg
gtgtacaccttcgccaacacgatcaacacgcacgagggcggcacgcacgaagagggcttc
cgcgccgcgctcacccgcgtggtcaacgcgtacgcgcgcgagaagaagctgctcaaggag
aaggacgcgaacctgaccggcgacgacgtgcgcgagggtctcgccgcgatcgtgtcgatc
aagctggccgaaccgcagttcgagggccagaccaagaccaagctgggcaacagcgaggcc
aagacgttcgtgcagcagcagtcgaacgaatggctcggcgactggttcgagcgcaacccg
agcgaagccaagacgatcatcaacaagtcgatctcgtcggcgcaggcccggctcgccgcc
cgcaaggcgcgcgacctggtgcggcgcaagggcgcgctggagatcggcggacttccgggc
aagctcaaggactgccgctcgaacgaccccggcgaatgcgagctctacatcgtggagggc
gactcggcgggcggttcggccaaggaaggccgcgactcgatgtaccaggcgatcctgccg
atccggggcaagatcatcaacgtcgagaaggcccgcatcgaccgcgtcctcaagaacacc
gaggtccagtcgctgatcaccgcgctcggcaccggcatccacgacgatttcgacatctcg
aagctgcggtaccacaagatcgtgctgatggccgacgccgacgtcgacggccagcacatc
accacgctgctgctcaccctgctgttccggttcatgacgccgctgatcgagcacggccac
gtgttcctgtcgcggccgccgctgtacaagatcaagtggccgcggtcggagccggagtac
gcgtactcggacaaggaacgcgacgcggtcatccaggccggcgtcgaggcgggccgccgt
cttccgaaggacgacgcgatccagcggtacaagggtctcggcgagatgaacgccgaggag
ctgtgggagaccacgatggacccggcgaaccggctgctcgggcaggtcaccctcgacgac
gccgcgcaggccgacgaactgttctccgtgctgatgggcgaggacgtggaagcccgccgc
tcgttcatcacgcgcaacgccaaggacgtgcgcttcctggacgtgtag
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