Amycolatopsis sp. AA4: CU254_40140
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Entry
CU254_40140 CDS
T05278
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc03030
DNA replication
amyc03430
Mismatch repair
amyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CU254_40140
03430 Mismatch repair
CU254_40140
03440 Homologous recombination
CU254_40140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyc03032
]
CU254_40140
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_40140
Enzymes [BR:
amyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CU254_40140
DNA replication proteins [BR:
amyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CU254_40140
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CU254_40140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
TerB
DUF2583
Motif
Other DBs
NCBI-ProteinID:
ATY15909
UniProt:
A0A2K8M5J2
LinkDB
All DBs
Position
8646091..8647503
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AA seq
470 aa
AA seq
DB search
MAELIERLSLSSRGRVPASGTEFTALDVKTTGLHTGRVLEVAAIRFRGDGTFLGEFATVV
AADASRRNPHRITAAELADAPALSGILGRLFELCQGAVLVAHDLSSVEGLLTEIGQLGVR
LPRLPAISLKDTAQAALPLPNYRLATIARAFGIEDFPGYLAEPAARACAQAMLALVGTHG
LRLAQPVRFPELPWYAGNAATLRRTVAGAETGWMAEAVDRVPAGAWGPVAQAYLDLLAEA
VGDQFLTDEEVWALADLAAEAGMAAAEVQRIHTGFIAELRRVAEADGVVTSAEYRELRQV
ADALGALEVVVDLKVTATGDKPTRVLVLGTTADADQLRARVLSEGFQLAKNLTGSVTHLA
YDSGVRDSEPRLSRALELGAHVARLDEAAVLLGFAPAPQPRHQKAPSSSGHLVGRVLMGL
GLVLMVLTVAAMFGGAGLGPGIVLAVFAVGALVGGWYLDETKRATAGSAG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggccgagctgatcgaacgactgtccctgtcctcgcgcgggcgggtgcccgcgagcggc
acggaattcaccgcgctcgacgtgaagacgaccggactgcacaccggccgggtcctggag
gtcgccgcgatccggttccgcggggacggaacgtttctcggcgagttcgcgacggtcgtc
gccgcggacgcgagccggcgcaacccgcaccgcatcaccgcggccgaactggcggacgcg
ccggccttgagcggcatcctcggccggttgttcgaactgtgccagggcgcggtcctcgtg
gcgcacgacctgtcctcggtggaagggctcctcaccgagatcggccagctgggcgtccgg
ctgccgcgactgccagcgatctcgctcaaggacaccgcgcaggcggcgttgcccctgccc
aactaccgcctcgccaccatcgcgcgcgccttcggcatcgaggactttcctggctacctg
gccgaaccggccgcccgggcatgcgcgcaggcgatgctcgcgctcgtcggtacgcacggg
ttgcggttggcgcagccggtgcgttttccggaactgccgtggtacgcgggcaatgcggcg
accctgcgccggacggtggccggtgcggagacgggctggatggccgaggcggtggaccgc
gttcccgcgggcgcctggggaccagtcgcgcaggcttacctcgacctgctcgccgaggcg
gtcggcgaccagttcctgaccgacgaggaggtctgggcgctcgccgacctcgccgccgaa
gccgggatggccgcggcggaggtgcagcggatccacaccggcttcatcgccgaactgcgc
cgggtcgcggaggccgacggggtcgtgacttccgccgaataccgcgaactgcggcaggtc
gcggacgcgctgggcgcgttggaagtggtggtggacctcaaggtcaccgctaccggggac
aagccgacgcgagtcctggtgctcggtacgacggcggacgcggaccagctgcgggcgcgg
gtgctgtccgaagggttccagctcgcgaagaacctcacgggttcggtcacgcacctggcg
tacgactcgggagtgcgcgactccgaaccgcggctttcccgggcgctcgaactcggtgcg
cacgtcgcgcggctcgacgaggccgccgtgctgctgggcttcgccccagctccgcagccg
aggcaccagaaagcaccgtcgagcagcgggcacctggtcgggcgggtgctgatgggcctc
gggctggtcctgatggtcctcacggtcgccgcgatgttcggcggggctgggctcgggccg
gggatcgtgctggccgttttcgccgtcggtgcgctggtcggcggctggtacctcgacgag
acgaagcgcgcgacggccgggtcagcgggctag
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