Amycolatopsis sp. DSM 110486: K1T34_03080
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Entry
K1T34_03080 CDS
T10626
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
amyd Amycolatopsis sp. DSM 110486
Pathway
amyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K1T34_03080 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyd03400
]
K1T34_03080 (recO)
DNA repair and recombination proteins [BR:
amyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K1T34_03080 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K1T34_03080 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
QYN21543
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All DBs
Position
complement(625009..625770)
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AA seq
253 aa
AA seq
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MVNLYRDTGVVLRTHKLGEADRIITLLTRRHGKVRAVAKGVRRTSSRFGARLEPFGHVDV
QFYTGRTLDVITQVETVDAFALPLVADYQRYTAASAIAETADRLSAEEGEPVLKLYLLVV
GALRALAGGERDASLVLDAFFLRAMAYAGWAPAITECARCGLPGPHAAFNVAAGGSMCPD
CRIAGSVHPAPEVLTLLEALLHGEWPVAEASHGVTRRDASGLVAAHLQWHLERQLRSLPL
VERRARETVTPAK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaacctctaccgcgacaccggagtggtgctgcgcacgcacaagctgggtgaggcc
gaccggatcatcaccctgctgacccgccggcacgggaaggtccgtgccgtggccaagggc
gtgcgccgcacctcgtcgcggttcggggcccggctggagcccttcgggcacgtggacgtg
cagttctacaccggccgcacgctcgacgtgatcacccaggtcgagaccgtggacgcgttc
gcgctgccgctggtcgccgactaccagcgctacaccgcggccagcgcgatcgccgagacc
gccgaccggctctcggccgaagagggcgagccggtcctcaagctgtacctgctggtcgtg
ggcgcgttgcgcgcactcgcgggcggtgaacgcgacgcctctctcgtcctcgacgcgttt
ttcctgcgggccatggcctacgccggctgggcgcccgccatcaccgagtgcgcccgctgc
ggcctgcccggcccgcacgccgcgttcaacgtggccgccggcggctcgatgtgcccggac
tgccgcatcgccggttccgtgcaccccgcgcccgaggtgctcaccctgctcgaggccctg
ttgcacggcgaatggccggtggcggaggcctcgcacggcgtgacccggcgtgacgcgtcg
ggcctggtggcggctcacctgcagtggcacctcgaacgccagctgcgttcgcttccactg
gtcgaacggcgtgcccgggagaccgtgacaccggccaagtag
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