Amycolatopsis sp. DSM 110486: K1T34_18525
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Entry
K1T34_18525 CDS
T10626
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
amyd Amycolatopsis sp. DSM 110486
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Gene cluster
GFIT
Motif
Pfam:
TPR_12
HTH_31
HTH_3
HTH_37
HTH_19
HTH_26
TPR_19
HNF-1_N
MarR_2
UPF0175
DUF7343
Cohesin_load
Motif
Other DBs
NCBI-ProteinID:
QYN24258
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Position
3826608..3827996
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AA seq
462 aa
AA seq
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MDASAGDKVSGGSGGSPVPPDAWEQQEMRSALAAREISAVYRLLRKHGVSQRQIAAMTGQ
SQSEVSEILKGRQVMAYDVLTRIADGLGVPRGYMGLAYDETTAIRVVGSSDGRQAEEDES
VKRRRFLAHAAQVTMGAAVFGSESGTWSAAPARTPAPGRIGTTDVRQVEAATRALRALDY
QYGGGFCRDAVVAQLSWGQQMLESTATEVVKQRLFVALADLHSLAGWTSFDTGLMDSARG
HFANALDLAKQGDSHPLVANVLYRMGRVYLHNDAPNDALKLFQLGQIAAQESGSELAVAV
LCANEAWAYAMMGNEDQATKLLGRSKDEFARADLVNAESWVKFFNETDVYAMTGTVHTVL
AQKNSEHTKYAIPALTRAVDSYTDDMARSKTFMLSALATNHLLDGDLDHGAKVGGKALDY
AESIKSERIKDRLRPLQVEAERRRNNGDARDLADRLKIFYAA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggacgccagtgctggcgacaaggtttccggtggttccggcggcagcccggttccgccc
gatgcctgggaacagcaggaaatgcgctctgcgctggcggcccgggagatcagcgcggtg
tatcgcctgttgcgcaagcacggtgtctcgcagcgccagatcgccgcgatgaccggccag
tcgcagtccgaggtgtcggagatcctcaagggacgccaggtcatggcgtacgacgtgctc
acgagaatcgccgacggcctgggtgtcccccgtggatacatgggtctcgcgtacgacgag
accacggcgatacgggtcgtcggttcgtccgacggccggcaggctgaggaggacgagtcc
gtgaagcgacggaggttcctcgcgcacgccgcccaggtcacgatgggtgcggcggtgttc
ggttcggaatccgggacgtggtcggcggcgccggcgcgcacgcccgctcccgggcgcatc
gggacgaccgacgtccgccaggtcgaggcggcgacgagggcgctgcgcgcgctcgactac
cagtacggcggcgggttctgccgcgacgccgtggtggcgcagctgtcctggggccagcag
atgctcgagtccaccgcgaccgaggtggtgaagcagcgcctgttcgtggcgctcgccgac
ctgcacagcctcgccggctggacctcgttcgacaccggcctgatggactccgcccgcggt
cacttcgccaacgcgctggacctggccaaacagggtgacagccacccgctcgtcgccaac
gtcctctaccgcatgggccgtgtctacctgcacaacgacgccccgaacgacgcgctgaag
ctcttccagctcggccagatcgccgcgcaggagtcgggttccgagctcgccgtcgcggtg
ctctgcgccaacgaggcctgggcctacgcgatgatgggcaacgaggaccaggccaccaag
ctgctcggccgcagcaaggacgagttcgcgcgcgccgacctcgtcaacgccgagtcgtgg
gtgaagttcttcaacgagaccgacgtctacgcgatgaccggcaccgtgcacaccgtgctg
gcgcagaagaactccgagcacaccaagtacgcgattcccgccctgaccagggccgtcgac
tcctacaccgacgacatggcgcgcagcaagacgttcatgctcagcgcgctggccaccaac
cacctgctcgacggcgacctcgaccacggcgccaaggtgggcggcaaggccctcgactac
gccgagagcatcaagtcggagcgcatcaaggaccgcctgcgcccgctgcaggtggaggcc
gagcgtcgacgcaacaacggtgacgcccgtgacctcgccgaccggctcaagatcttctac
gccgcctga
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