Amycolatopsis sp. DSM 110486: K1T34_18740
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Entry
K1T34_18740 CDS
T10626
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
amyd Amycolatopsis sp. DSM 110486
Pathway
amyd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K1T34_18740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyd03400
]
K1T34_18740
Enzymes [BR:
amyd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K1T34_18740
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K1T34_18740
DNA repair and recombination proteins [BR:
amyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K1T34_18740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
Zn_ribbon_TFIIB
DUF7577
Motif
Other DBs
NCBI-ProteinID:
QYN24297
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All DBs
Position
3870632..3871492
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AA seq
286 aa
AA seq
DB search
MPELPEVEALAHHLREHAVGATVFRLDVASLSVLKTAVPPYTELHGREITGATRHGKHLD
VVLGDLHLVVHLARAGWLRWSDQLSPTPLKPGKGPISLRVHLNAAAGPGFDLTEAGTKKG
LAVWIVHDPSEIPSVARLGPDALSLDASQLRELFAGKGTRLKWALTDQSLIAGIGNAYSD
EIMHKAKLSPYATVGKLDEGALETLAAAIHDIESDAVQRSVGQKAAMLKGEKRSGLRVHA
RTGLPCPVCGDTIREISFADKSFQYCPTCQTGGKPLADRRMSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtcgaagcactcgcccaccacctgcgcgaacacgccgtgggc
gccacggtgttccgcctcgacgtcgcctcgctcagcgtcctgaagacggccgtgccgccc
tacaccgagctgcacgggcgcgaaatcaccggcgccacccgccacggcaagcacctcgac
gtggtcctcggcgacctgcacctcgtcgtccacctcgcgcgcgccggctggctgcgctgg
tccgaccagctttcgcccacgccgttgaagccgggcaagggcccgatctcgctgcgcgtg
cacctcaacgcggcggccggcccgggcttcgacctcaccgaggccggtacgaagaagggc
ctcgccgtctggatcgtccacgacccgagcgagatccccagcgttgcgcgcctcggcccc
gacgcgctgtcgctcgacgcgtcgcagctgcgcgagctcttcgccggcaagggcacgcgg
ctcaagtgggcgctcaccgaccagtcgctcatcgccggcatcggcaacgcctactccgac
gagatcatgcacaaggccaagctctccccgtacgccaccgtcggcaagctcgacgagggt
gcgctggagacgttggccgccgccatccacgacatcgagtccgacgccgtgcagcgctcc
gtcggccagaaggccgcgatgctcaagggcgagaagcgctcgggcctgcgcgtgcacgcc
cgcacaggcctgccctgcccggtctgcggcgacaccatccgcgagatctcgttcgccgac
aagtccttccagtactgccccacctgccagacgggcggcaaacccctggccgaccgccgg
atgtcgcggctgctcaagtaa
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