Amycolatopsis sp. DSM 110486: K1T34_21490
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Entry
K1T34_21490 CDS
T10626
Name
(GenBank) hypothetical protein
Organism
amyd Amycolatopsis sp. DSM 110486
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
WXG100
PPE
T7SS_signal
EspA_EspE
DUF6693
Motif
Other DBs
NCBI-ProteinID:
QYN24781
LinkDB
All DBs
Position
complement(4415276..4420615)
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AA seq
1779 aa
AA seq
DB search
MSNPLIAPTQDSTKAYSGITLLEDANDLKTAIETGDWASVAMGAVGTALDALSMAMDPFG
AILAAGVGWLMEHVGPLKEALNGLTGNADQIAAQSETWKNVAGELEAVASDLQDMVQADL
QSWTGSAADAYRQRSQDLASLLGSAQKGTEGAASGVKTAGEVVGAVRALVRDIIADLIGH
MISWALQVVFTLGIGLTWVVPQVINAVAKTASKITDVVTKLVKALKALIPLLKKAGTLFE
DAGKALKGLKGGKISAPPKPKTVDAPPKAPDVKTPPKGGGDSTTASGYTPPPKHDTPSPT
KNDDSTTASSAGDTPPPLKNDPPPAAKTDDSTSASGAGGTPPPLKNDPPPKTNDSTSASS
AGDTPPPAKNSPPPLDPPPADRGLPGGGNGGGTGGGKGGGKDTTSAQSSIKDTNTTPRSN
DTPTADRLACGDPIDVSTGRVMLTQEDVRLDAALPLVLSRTHLSSYRIGRAFGASWASTL
DQRLEADGDAVHFAAEDGTFLEYPKPVVGGEVLPVTGPAWPLTRAIDGSYVLTQPDRGRA
LLFSGATGRLVTVSTMTGDQHFRLSYDDAGTLTDLTHSAGHHVGVTTDGGHVTELTLLSG
GAPVVLVRYAYDERANLAEVRNSSDLPLRFGYDAEGRLASWEDRNGMWYRYSYDAQGRCV
RAEGRDGDLRYGLAYDPRRTTAVDSLGATTVFDLNDAFQVVAVTDPLGFTTRMEWDDRDR
LLSSTDALGATTRNQYDEAGDLVEIVAADGSRTTAEYDDEHRPVKVVEADGAVWLREYTE
DGDIAAAVDPLGARTRFEYARPGLPATVTGPLGEVTRYEYDAAGLPVAVTDAVGATQRTV
FDRFGRPAAETTALGAVTRTAWTVEGEPLSVTRPDGTSVSYRHDGEGNLRETREATTVSR
TDYSGFDRPVAVTAVDGSRVELSYDTETRVTGVRNELGARWRYEYDAAGRLAADTDYDGR
RRAFRYDAAGRLVEQTSAGGRVLRFGYDAVGRIVRLDADGAVATYEYDLAGRLVRAVNED
TDLRRTYDPAGRLVEESVNGRVLSSTFDASGRRTSRTTPTGAHAEWRHDAAGRPIALLTA
GRELTSVRDLEGREVERRLGNVRLRQAWDARDRLVTQTLVNGRPLQQRSLHYRHDDTVTA
VDDALTGRRQLRLDPIGRPLAVEAPASRETYGYDAAGNLVQPGNRVYAGSLLKRDDTAEY
EYDPDGKLVLRRTAQGNEWRYEWDGHERLVAVHTPAGHHWRYRYDALGRRVAKELLDAAG
TLRTRTEFTWDGEQLAEQVTDGVRALVWHTEPGSGRVLTQTERVLHQASGEWRDHSLRGV
VTDLAGAPTELLDAEQGLVWHGTLTAWGAATGPMPTPLRFAGQYHDDETGLHYNFHRYYD
PTAARYLSPDPSGLRPATNPYAYVADPVGWTDPLGLAPCKLSFDQAHSTPDGPSLNLRGP
RKSGKTGRTPNKIRDEQKFNDIAEKAGVPNPNKQRLTLNGDAQTMVENNRGLGGKLHEQA
RSDGLVSPVSKDRQAVDALGRNDPNTRNFWEQQDRRDQHTANQVTENNKQDHRDAGRDQE
VDDRLRPVMDKHEATGSLLDKYDGVVVGGKHDGKHPGLEMMRDNMGDLKNNGVNKVYLES
LRDDAHNGMVKDYLNSPPGSEMHPDLKKYLDSSPNGKLVGQVIDSAKKEGVDVIGIGGNP
ARRDLDGGAGLFQRHAMFNSYGAESVAHHQTANPGKYVMEIGEAHGKPHTWNGAAPVNVG
GVDLPPRSAGIGDLLGVPQVKGDGPGGTLQRIDGSTNLS
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcccttgatcgcgccgacccaggactcgacgaaggcgtattcgggcatcacg
ctgcttgaagacgccaacgacctgaagacggcgatcgagaccggtgactgggcgtcggtg
gcgatgggggcggtcgggacggcgctcgacgcgctgtcgatggccatggacccgttcggc
gcgatcctcgcggcgggcgtcggctggctgatggagcacgtcgggccgctcaaggaagcg
ctcaacggactgaccggcaacgcggaccagatcgcggcgcagtcggagacgtggaagaac
gtcgcgggtgagctggaggccgtggcctcggacctgcaggacatggtgcaggcggacctg
cagtcgtggacgggatccgcggcggacgcgtaccgccagcgcagccaggatctggcgtct
ctgctgggaagtgcgcagaagggcaccgaaggcgcggccagcggtgtgaagacggccggc
gaggtcgtcggcgcggtgcgggcgctggtgcgcgacatcatcgccgacctgatcgggcac
atgatcagctgggcgttgcaggtggtgttcacgctcgggatcgggttgacgtgggtggtg
ccgcaggtcatcaacgccgtcgcgaagaccgcgtcgaagatcaccgacgtcgtgacgaag
ctggtcaaggcgctcaaggcgttgatcccgctgctgaagaaggcggggacgctgttcgag
gacgcgggcaaggcgttgaaggggctcaagggcggcaagatctcggcgcccccgaagccg
aagaccgtcgacgcgccgccgaaggcgcccgacgtgaagacgccgccgaagggcgggggc
gacagcacgacggcgtcgggctacacgccgccgcccaagcacgacactccctcgccgacg
aagaacgatgactcgacgacggcgtccagcgccggggacactccgccgccgctgaagaac
gacccgccgccggccgcgaagacggacgactcgaccagcgcgtccggcgcgggcggcacc
ccgccgccgctcaagaacgacccgccgccgaagacgaacgactccacgagcgcgtccagc
gccggcgacaccccgccgccggccaagaacagcccgccgccgctcgacccgccgccggcc
gaccgcggcctgcccggcggtggcaacggtggtggcacgggtggtggcaaggggggcggc
aaggacaccacctccgcacagagctcgatcaaggacaccaacaccaccccgcgctcgaac
gacactccgacggccgaccgcctcgcctgcggtgaccccatcgacgtctccacgggccgg
gtcatgctcacgcaggaggacgtccggctggacgccgcgctgccgctggtcctctcgcgc
acgcacctgtcgtcgtaccggatcgggcgggccttcggcgcgtcgtgggcctcgacgctc
gaccagcggctcgaagccgacggcgacgccgtgcacttcgcggccgaagacggcaccttc
ctcgagtacccgaagcccgtggtcggcggcgaggtgctgccggtgaccggccccgcgtgg
ccgctgacgcgcgccatcgacggctcctacgtgctcacccagcccgaccgcggccgcgcg
ctgctgttctccggcgcgaccgggcgcctggtcacggtgagcacgatgaccggcgaccag
cacttccgcctgtcctacgacgacgcgggcacgctgaccgacctcacgcactcggcgggc
caccacgtcggcgtgaccaccgacggcggccacgtcaccgagttgacgctgctcagcggc
ggcgcgccggtcgtcctcgtgcgctacgcctacgacgagcgcgcgaacctggccgaggtc
cgcaactcctcggacctgccgctgcgcttcggctacgacgccgagggccggctcgcgagc
tgggaagaccgcaacggcatgtggtaccgctactcctacgacgcgcagggccgctgcgta
cgcgccgaaggccgcgacggcgatctgcgctacggcctcgcatatgacccgcgccgcacc
acggccgtcgactcgctcggcgccaccacggtgttcgacctcaacgacgcgttccaggtc
gtggcggtgaccgacccgctcggcttcaccacgcgcatggagtgggacgaccgcgaccgg
ctgctctcgagcaccgacgcgctcggcgccaccacccgcaaccagtacgacgaggccggc
gatctcgtggagatcgtcgcggccgacggctcccgcaccacggccgagtacgacgacgag
caccgcccggtgaaggtcgtcgaagccgacggcgcggtgtggctgcgggagtacacagag
gacggtgacatcgcggcggccgtcgacccactcggcgcgcgcacgcgcttcgagtacgcg
cggccggggctgcccgccaccgtgaccgggccgctcggcgaggtgacgcgctacgagtac
gacgccgcgggtctcccggtcgcggtgaccgacgccgtcggcgcgacgcagcgcacggtg
ttcgaccgcttcggccgccccgccgccgaaaccaccgcactgggcgcggtcacgcgcacc
gcgtggaccgtcgagggcgagccgctgagcgtcacccgcccggacggcacgagcgtgtcc
taccgtcacgacggcgaaggcaacctccgcgaaacccgcgaagccaccaccgtctcgcgc
acggactactccgggttcgaccggcccgtcgccgtgaccgcggtcgacggctcgcgcgtg
gaactgagctacgacaccgaaacccgcgtcacgggcgtgcgcaacgagctgggcgcgcgg
tggcgctacgagtacgacgccgccggccggctcgcggccgacaccgactacgacggccgc
cgccgcgccttccgctacgacgcggcgggccggctggtcgagcagacctcggccggcggc
cgcgtgctgcgcttcggctacgacgcggtgggccgcatcgtgcggctggacgccgacggc
gccgtcgccacctacgagtacgacctcgccggccggctcgtccgggccgtcaacgaggac
acggacctgcgtcgcacctacgaccccgccggccgcctggtcgaggagtcggtgaacggc
cgcgtgctgtcgtccactttcgacgcttcgggccgccgcacctcgcgcacgacgccgacc
ggcgcccacgccgaatggcgccacgacgcggcgggccggccgatcgcgctgctcaccgcg
ggccgcgagctcacctccgtgcgtgacctcgaaggccgcgaggtcgagcggcggctgggg
aacgtgcggctgcgccaggcctgggacgcgcgcgaccggctcgtgacgcagaccctcgtg
aacggtcggccgctgcagcagcgctccctgcactaccgccacgacgacaccgtgaccgcg
gtcgacgacgcgctgaccgggcggcggcagctacggctggacccgatcggccgtccgctg
gccgtcgaggccccggcgagccgcgagacctacggctacgacgcggcgggcaacctcgtg
cagcccggcaaccgcgtgtacgccggcagcctgctcaagcgcgacgacaccgcggagtac
gagtacgaccccgacggcaagctcgtgctgcgccggaccgcccaaggcaacgaatggcgg
tacgagtgggacggtcacgagcggctcgtcgccgtgcacaccccggccggccaccactgg
cgctaccgctacgacgcgctcggccgccgcgtcgccaaggagctcctcgacgccgccggc
accctgcgcacccgcaccgagttcacctgggacggtgagcagctcgccgagcaggtcacc
gacggcgtgcgggccctggtctggcacaccgaacccggcagcggccgcgtgctcacgcag
accgaacgtgtgctgcaccaggcgagcggcgaatggcgcgaccacagcctccgcggcgtc
gtcaccgacctcgcgggcgccccgaccgagctgctcgacgccgaacagggcctggtctgg
cacggcacgctcaccgcgtggggcgccgcgaccggtccgatgccgacgccactgcgcttc
gccgggcagtaccacgacgacgaaaccggcctgcactacaacttccaccgctactacgac
ccgaccgcggcgcgctacctcagccccgacccctcgggcctgaggccggcgacgaacccg
tacgcctacgtcgccgacccggtcggctggaccgacccgctcgggctggcgccgtgcaag
ctgtcgttcgaccaggcgcacagcacgccggacgggccctcgctgaacctgcgcggacca
cgcaagtcgggcaagaccggccggacgccgaacaagatccgcgacgagcagaagttcaac
gacatcgcggagaaggccggtgtgccgaacccgaacaagcagcgcctgacgctcaacggc
gacgcccagacgatggtggagaacaaccgcgggctcggcgggaagctgcacgaacaagcg
cgcagcgatggcctggtctcaccggtgtccaaggaccggcaggccgtcgatgcgctgggc
cgcaacgacccgaacacgaggaacttctgggagcagcaggaccggcgcgaccagcacacg
gcgaaccaggtgaccgagaacaacaagcaggaccaccgcgacgccggccgcgatcaggaa
gtggacgaccggctgcgccccgtcatggacaagcacgaggccaccggctcgttgctggac
aagtacgacggcgtggtcgtcggcggcaagcacgacggcaagcacccgggcctggagatg
atgcgcgacaacatgggcgacctgaagaacaacggcgtcaacaaggtctacctggaaagc
ctgcgcgacgacgcgcacaacggcatggtcaaggactacctcaactccccgcccggcagc
gagatgcacccggatctgaagaagtacctcgactccagcccgaacggcaagctggtgggc
caggtgatcgactcggcgaagaaggagggcgtcgacgtcatcggcatcggcggcaacccc
gcgcggcgcgacctcgacggcggcgccgggctgttccagcgccacgcgatgttcaactcc
tacggcgctgagtcggtggcgcaccaccagacggccaacccgggcaagtacgtgatggag
atcggcgaggcgcacggcaaaccgcacacgtggaacggtgccgcaccggtcaacgtcggt
ggcgtcgacctgccgccgaggtcggcggggatcggcgacctgctcggcgtgccgcaggtg
aagggcgacggcccgggtggcacgctgcagcggatcgacggttcgacgaacctgagctga
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