Amycolatopsis sp. DSM 110486: K1T34_25005
Help
Entry
K1T34_25005 CDS
T10626
Name
(GenBank) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
amyd Amycolatopsis sp. DSM 110486
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyd03032
]
K1T34_25005
03400 DNA repair and recombination proteins [BR:
amyd03400
]
K1T34_25005
Enzymes [BR:
amyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K1T34_25005
DNA replication proteins [BR:
amyd03032
]
Prokaryotic type
DNA Topoisomerases
K1T34_25005
DNA repair and recombination proteins [BR:
amyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K1T34_25005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Intein_splicing
LAGLIDADG_3
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
QYN25397
LinkDB
All DBs
Position
complement(5123509..5126994)
Genome browser
AA seq
1161 aa
AA seq
DB search
MARRKGTTTKVDPSAFDSAGANVFDNSLKTEIEDSYLEYAYSVIHSRALPDARDGLKPVH
RRILFSMHEQGYRPTHAYVKSSRVVGDVMGKFHPHGDVAIYDAMVRLAQDFSLNVPLIDG
HGNFGSPDDGPAASRYCLTGDTRIRLADGSSPRIGDLVNLPADSEADADFEVLDKDGKAV
RVDKVFNSGEHPTVRITTKSGFSIQGSENHPVLCLEAPMGVPMFQWRQLDEVKPGTVVCL
ARNAWTQVVPTADEHITAAFASADAEFVPESVWAGGPGVKRAFLMALFERGGECRRAGGA
YTVEYPTRCERLASEIQELLAEFGVIATHERGTVGSVEHRLVVSGPREIQAFAERIGFLK
TKHADLQGLLEQFGRHAHQLSDDRVPFVADYVGSDVDFDRIERWETERLRIIDRIKDTEV
LSTILPIMDSGYRFEEITEVEACDPAEVYSVRVATEDHSFLAGGFVNHNTEARMSPEAMH
LVGELGEDTVDFRPNYDGSLEEPSVLPAAFPNLLVNGTSGIAVGMATNMIPHNLGEVIAA
ARWLITHPTATLDKLMEFVPGPDLPTGGKLLGLDEVRRAYATGRGVVRMRANVETGPLEG
SRGRQAITVVELPYGVGPEKVIEKITDEVNKSKRLTGIADVKDLTDRENGTRLVIECKVG
VNPQALLADLYRLTPLEQSFGINNLVLVDGQPQTLGLKELLEVFLRHRYDVVTRRTKFRR
RKREERLHLVDGLLIALLNIDKVIKLIRESENAQAAKDGLMTRFKLSEIQATYILDTPLR
RLTKYDRLELESEQERLREEIAELTTILDDDSVLKKLVSSELAKIAKDFPTERRTALIDG
DLKEVLAASKPSGPLEITDDPCQVILSATGLVARTAAESEESSEVRRRNGRVKHDAVSAI
VHTTARGQVLLVTSRGRAFKTDVLPLPVLPEQAGTVSLRGGMAARELVPLEKGETVVGVA
PLGEQATGSPGLAIGTRAGVVKVVAPEWPVRSDEFEIITLKAGDEIVGATWLTDGEETLA
FMSSEASLLRFAASLVRPQGLKGGGMAGINLSAGASVVFFGAVRTDDDDHGEPMVVTATG
QSVKVTPFSEYPAKGRATGGVRAHRFLKGEDSVAVAWIGPRPAAAARNGDPVELPEVDLR
RDGSGHAHPGPDVVGHTIERD
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgccgcaagggcaccaccaccaaggtcgatcccagcgcgttcgactccgccggg
gccaacgtcttcgacaactcgctcaagacagagatcgaagactcgtacctggagtacgcg
tactcggtcatccactcgcgcgcgctgcctgatgcgcgggacgggttgaagccggtgcac
cggcggatcttgttctcgatgcacgagcagggttaccggccgacacacgcctacgtgaag
tcgtcccgcgtggtcggcgatgtaatgggcaagttccatccgcacggtgacgtcgcgatt
tacgacgccatggtgcggctggcgcaggacttctcgctcaacgttccactgatcgatggg
cacggcaacttcggctccccggacgacggtccggctgccagccgatactgcttgacgggc
gacacccggattcggctcgccgatggatccagccctcgcatcggcgatctggtgaacctg
cccgccgactccgaggccgacgccgacttcgaggtactggacaaggacggcaaggcagtc
cgggtcgacaaggtcttcaactccggcgagcaccccaccgtccggatcacgacgaagtcc
gggttctcgatccagggcagcgaaaaccacccggtgctgtgtctcgaggcgcccatgggc
gtcccgatgttccagtggcgccagctcgacgaggtcaagccgggcaccgtggtgtgtctc
gctcgcaacgcgtggacccaggtcgttccgaccgccgatgagcacatcaccgccgcgttc
gcctccgctgatgccgagttcgtgcccgagtcggtctgggccggcggtcccggcgtcaaa
cgagcattcctgatggccctgttcgagcgcggtggggaatgccgacgggccggtggcgcg
tacacggtcgaatacccgacccgctgcgagcggctcgcatcggagattcaggaactgctg
gccgagttcggtgtcatcgccacgcacgaacgcggcactgtcggttcggtcgagcaccgg
ctggtcgtgtccggtccgcgcgagatccaggcgttcgccgagcgaatcggcttcctgaag
accaaacacgccgacctgcagggcctgctggagcagttcggtcggcacgcgcaccagctc
agtgacgaccgggtgccgttcgtcgcggactacgtcggtagcgatgtcgacttcgatcgc
atcgaacgctgggagaccgagcggctccggatcatcgaccggatcaaggacaccgaggtc
ctctccacgatcctgccgatcatggactcgggttaccgcttcgaggagatcaccgaggtc
gaggcctgcgatcccgccgaggtctactcggtgcgcgtggccacggaggaccattcgttc
ctcgccggtggtttcgtcaaccacaacaccgaagcccgcatgtctcccgaagcaatgcac
ctggtcggcgagctcggtgaagacaccgtcgacttccggcccaactacgacggttccctc
gaagagccgtcggtgctgcccgcggcgttcccgaacctgctggtcaacggcacgtcgggc
atcgcggtcggcatggcgaccaacatgatcccgcacaacctcggcgaggtcatcgcggcg
gcgcggtggctgatcacgcacccgacggcgacgctcgacaagctgatggagttcgtgccc
ggccccgacctgccgacgggtggcaagctgctcggcctggacgaggtgcgccgcgcgtac
gcgacgggtcgcggcgtggtgcggatgcgcgcgaacgtcgagaccgggccgctggaaggc
agccgcgggcggcaggcgatcacggtcgtcgagctgccctacggcgtgggcccggagaag
gtgatcgagaagatcaccgacgaggtcaacaagtccaagcggctcaccggcatcgccgac
gtcaaggacctcaccgaccgcgagaacggcacgcggctcgtgatcgagtgcaaggtcggc
gtgaacccgcaggcgctgctggcggacctgtaccggctgacgccgctggagcagtcgttc
ggcatcaacaacctggtgctcgtcgacggccagccgcagacgctcggcctcaaggagctg
ctggaggtcttcctccgccaccgctacgacgtggtcacgcggcgcaccaagttccgccgc
cgcaagcgtgaagagcggctgcacctcgtcgacggcctgctgatcgcgctgctgaacatc
gacaaggtcatcaagctcatccgcgagagcgagaacgcgcaggcggccaaggacggcctg
atgacgcgcttcaagctctcggagatccaggccacctacatcctggacacgccgctgcgc
cgcctgaccaagtacgaccggctggagctggagtcggagcaggagcggctgcgcgaggag
atcgcggagctgacgacgatcctcgacgacgactcggtgctgaagaagctcgtgtcctcg
gagctggcgaagatcgcgaaggacttcccgaccgagcggcgcaccgcgctgatcgacggt
gacctcaaggaggtgctggcggcgtcgaagccgtccgggccgctggagatcaccgacgac
ccgtgccaggtcatcctgtcggccaccggccttgtcgcccgcacggcggcggagtcggag
gagtcgtccgaggtcaggcggcgcaacggccgcgtgaagcacgacgccgtgtccgccatc
gtgcacacgaccgcgcgcgggcaggtgctgctggtgaccagccgcgggcgcgcgttcaag
acggacgtgctgccgttgccggtgctgcccgagcaggccggcacggtctcgctgcgcggc
ggcatggcggcgcgcgaactggtgccgttggagaagggcgagacggtggtcggcgtcgcc
ccgctgggcgagcaggcgacgggttcaccgggtctggcgatcggcacgcgcgccggcgtg
gtgaaggtggtcgcgccggagtggccggtgcggtccgacgagttcgagatcatcacgctc
aaggccggcgacgagatcgtcggcgccacctggctcaccgatggtgaggaaacgctggcg
ttcatgtcgtccgaagcgtcgctgctgcgcttcgccgcgtccctcgtgcggccgcagggc
ctgaagggcggcggcatggccggcatcaacctgagcgccggcgcttcggtggtgttcttc
ggtgccgtccgcaccgatgacgacgaccacggcgagcccatggtcgtcacggccacgggc
cagtcggtgaaggtcacgccgttcagcgagtaccccgcgaagggccgcgccacgggcggc
gtgcgcgcccaccgcttcctcaagggcgaggattcggtggccgtcgcctggatcggtccc
cgccccgccgccgcggcccgcaacggcgaccccgtggagctccccgaggtcgacctccgc
cgcgacggctccggccacgcccaccccggcccggacgtcgtgggccacaccatcgagcga
gactga
DBGET
integrated database retrieval system
