Amycolatopsis sp. DSM 110486: K1T34_26030
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Entry
K1T34_26030 CDS
T10626
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
amyd Amycolatopsis sp. DSM 110486
Pathway
amyd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K1T34_26030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyd02000
]
K1T34_26030
Transporters [BR:
amyd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K1T34_26030
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QYN25574
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All DBs
Position
5340414..5341649
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AA seq
411 aa
AA seq
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MSRALAIHVRFTTRLCPSWTVRSAFPHPGYQRTGQVKRRFAALAAVAAAGTLLLTACGGG
ASGSEQSSGVATAKSAADLGGMDKLVEAAKKEGELNVIALPHDWANYGEILDAFKKKYGL
KVTEANPEGSSQDEINAVKQLKGQDRAPDVVDLGSAFALSAASDGLLAPYKVTTFDDIPA
GQKADDGSWFFDYGGFISIGYDASKVTDPPKTLADLKKPEYKGKVALNGDPTKAGAAFAG
VYAAALANGGSFADIKPGVQFFADLKKSGNFIPVQSSAATIESGQTPITLDWDYLQAGYA
AKLKGKVDWKVTVPSDGIYSNFYAQGISKTAPHPAAARLWEEFLYSDEGQNLFLKGLSRP
ARLPKMEAAGTADKTALAALPKVEGDVKFPTDAQVNDAKKVLADEWAKALG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcactggccattcacgtccggttcacgacccgtctgtgtccttcgtggact
gttcgctcggcattcccacaccccgggtatcaaaggactggacaagtgaaaagacgtttc
gctgccctggccgcggtcgcagccgccggcacgctcctgctcaccgcctgcgggggtggc
gcgtcgggctcggagcagagctcgggcgtcgccaccgccaagtccgccgccgacctcggt
ggtatggacaagctcgtcgaggcggccaagaaggagggcgagctcaacgtgatcgccctg
ccgcacgactgggccaactacggcgagatcctcgacgccttcaagaagaagtacggcctg
aaggtcaccgaggccaaccccgagggctcgagccaggacgagatcaacgccgtcaagcag
ctcaagggccaggaccgcgcgcccgacgtggtcgacctcggcagcgcgttcgccctctcg
gccgcgtccgacggcctgctggcgccctacaaggtcaccacgttcgacgacatcccggcg
ggccagaaggccgacgacggctcctggttcttcgactacggcggcttcatctccatcggc
tacgacgcctcgaaggtcaccgacccgccgaagacgctggccgacctcaagaagcccgag
tacaagggcaaggtcgcgctgaacggcgacccgacgaaggcgggcgcggcgttcgccggc
gtctacgccgcggccctggccaacggcggttcgttcgccgacatcaagccgggcgtgcag
ttcttcgccgacctcaagaagtccggcaacttcatcccggtgcagtcgagcgcggccacc
atcgagagcggccagaccccgatcacgctcgactgggactacctgcaggccggttacgcc
gcgaagctcaagggcaaggtcgactggaaggtcaccgtcccgagcgacggcatctactcc
aacttctacgcccagggcatcagcaagaccgccccgcaccctgccgccgcgcggctgtgg
gaggagttcctctactccgacgagggccagaacctgttcctgaagggcctttcgcgcccg
gcgcgcctgccgaagatggaagcggccggcaccgccgacaagaccgcgctggccgccctg
ccgaaggtggagggcgacgtcaagttccccaccgacgcgcaggtcaacgacgccaagaag
gtcctggccgacgagtgggccaaggcgctcggctga
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