KEGG   Amycolatopsis sp. DSM 110486: K1T34_27185
Entry
K1T34_27185       CDS       T10626                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
amyd  Amycolatopsis sp. DSM 110486
Brite
KEGG Orthology (KO) [BR:amyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amyd03032]
    K1T34_27185
   03036 Chromosome and associated proteins [BR:amyd03036]
    K1T34_27185
   03400 DNA repair and recombination proteins [BR:amyd03400]
    K1T34_27185
DNA replication proteins [BR:amyd03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    K1T34_27185
Chromosome and associated proteins [BR:amyd03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    K1T34_27185
DNA repair and recombination proteins [BR:amyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      K1T34_27185
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QYN16562
LinkDB
Position
complement(5596254..5596892)
AA seq 212 aa
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGTKKLPKATAVKRTTTATASRATTTTRATA
SRTTATRPAATRSTTTRTRATAAKPAAATKTAAAKPAATRAKATTTKAAAAKPATKATAT
KAAAAKPAAAKPAAKKAAAKPAAKRTSAAKKK
NT seq 639 nt   +upstreamnt  +downstreamnt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgtctgggcgacaaaaaggtt
gcttcggaggccgtcgacggtctcgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccgggttcggtgtgttcgagaagcgtgcccgtgccgctcggaccgcg
cgtaacccgcgcacgggtgagacggtgcgggtgaagaagaccaacgtgccggccttccgt
gcgggcacgacgttcaaggacgtcatctccggcacgaagaagctgccgaaggccaccgcc
gtcaagcgcaccaccacggcgactgcgtcgcgcgccaccacgacgacgcgtgcgaccgcc
tcgcgcacgacggccacccgccccgcagcgacgcgctccaccaccacccgcacccgcgcg
acggccgcgaagcccgccgccgccacgaagaccgccgccgccaagccggccgcgacgcgc
gcgaaggccacgaccaccaaggccgccgccgcgaagcccgccaccaaggccacggcaacg
aaggccgctgccgcgaagccggccgctgccaagccggctgcgaagaaggccgctgccaag
ccggccgccaagcgcaccagcgctgcgaagaagaagtaa

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