Amycolatopsis sp. DSM 110486: K1T34_27210
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Entry
K1T34_27210 CDS
T10626
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
amyd Amycolatopsis sp. DSM 110486
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyd03032
]
K1T34_27210
03036 Chromosome and associated proteins [BR:
amyd03036
]
K1T34_27210
03400 DNA repair and recombination proteins [BR:
amyd03400
]
K1T34_27210
DNA replication proteins [BR:
amyd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K1T34_27210
Chromosome and associated proteins [BR:
amyd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K1T34_27210
DNA repair and recombination proteins [BR:
amyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K1T34_27210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Phage_L5_Gp45
Motif
Other DBs
NCBI-ProteinID:
QYN16567
LinkDB
All DBs
Position
5601721..5602398
Genome browser
AA seq
225 aa
AA seq
DB search
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGTKKLPKATAVKRTTTATAATASRATTTRA
TAATGTRAAASRTAATRPATTRSTTTRTRATAAKPAAATKTAAAKPAATRAKAATTTTKA
AAAKPAAKATATKAAAAKPAAAKPAAKKAAAAKPAAKRTSAAKKK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgtctgggcgacaaaaaggtt
gcttcggaggccgtcgacggtctcgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccgggttcggtgtgttcgagaagcgtgcccgtgccgctcggaccgcg
cgtaacccgcgcacgggtgagacggtgcgggtgaagaagaccaacgtgccggccttccgt
gcgggcacgacgttcaaggacgtcatctccggcacgaagaagctgccgaaggccaccgcc
gtcaagcgcaccaccaccgccacggctgccaccgcctcccgcgcgaccaccacgcgcgcg
accgcggcgaccggcacgcgtgcggctgcctcgcgcaccgcggcgacccgcccggccacc
acgcgctccaccacgacgcgtacccgcgccaccgctgcgaagccggccgctgcgacgaag
accgccgccgccaagcccgccgcgacgcgcgcgaaggccgccaccacgaccaccaaggct
gccgctgcgaagccggccgccaaggccacggcgaccaaggccgctgccgcgaagccggcc
gctgccaagcctgctgcgaagaaggccgccgccgccaagccggccgccaagcgcaccagc
gctgcgaagaagaagtag
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