Amycolatopsis sp. DSM 110486: K1T34_32010
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Entry
K1T34_32010 CDS
T10626
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amyd Amycolatopsis sp. DSM 110486
Pathway
amyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K1T34_32010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyd03400
]
K1T34_32010
Enzymes [BR:
amyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1T34_32010
DNA repair and recombination proteins [BR:
amyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K1T34_32010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
QYN17419
LinkDB
All DBs
Position
6589413..6591575
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AA seq
720 aa
AA seq
DB search
MSSSEPAPLWDLPEPSRSASEPKASSSRAGAAKAAVPKSGAASGAAAKKAAAKKAPSRKG
AQQPAPELPVAKIVVDIPLAHLDRTFDYQVPDKLHDAAVPGCRVRVRFAGQLVDGYLVER
TDTTEYERKLAYLERVTSSEPVLPPSLHAVCRSVADRYGGTLSDVLRLALPPRHAKAEAE
PASEPAPSPDVPDVSAWSRYQWGPAFLDAVADGKPANAVWQALPGEDWPRRLAEAAAVAA
SCGRGAVLVVPDHRDLTRVHEACAALMGEDAVVALIAGLGPAERYRRWLAVLRGGVRVVV
GTRAAMFAPVADPGLFVVWDDGDDLHLDPHAPYPHVRDVLMDRAHATKSSLLVGGFARTA
EAQLLVESGWAQAVLADRAELRAAAPRVTPVGEDFDVARDEAARVARLPAVAFEAARQAF
AAGLPALIQVPRRGYVPGLACGNCRTPAHCRRCAGPLALPGGSVDGAPKPPACRWCGVPE
TAFHCQACGSVRLRAVIVGAKRTAEELGRAFPGVPVRTSGAAEVLATVPGGPALVVCTPG
AEPVAEGGYGAALLLDGWALLGRQDLRAAEETLRRWMAAGALVRPAASGGRIVVGAEAGL
SVVQALVRWDPAWHAALELGQRRELGFPPAMRMASVEGTPDAVASVLDDLPLPDTGEVLG
PVPLGDFDADGNASRERALVRVARPEGKTLAALLHDAAARRDARKAAEPVRIQLDPLELI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagctccgaacccgccccgctgtgggacctcccggagccttcgcgctccgcctcg
gagccgaaggcttcttcgtcgcgtgccggtgcggccaaagctgctgtgccgaagtctggt
gctgcgtccggtgctgcggcgaagaaggccgccgcgaagaaggctccgtcgcgcaagggg
gcgcagcagccggcgcccgagctgcccgtcgcgaagatcgtggtggacatcccgctggcg
cacctggaccggacgttcgactaccaggtgcccgacaagctgcatgacgccgcggtgccg
ggttgccgcgtgcgggtgcggttcgcggggcagctcgtggacggctacctcgtggagcgc
acggacaccacggagtacgagcggaagctggcgtacctggagcgcgtcacgtcgagtgag
ccggtgttgccgccttcgctgcacgccgtgtgccggtcggtggccgaccgctacggcggc
accctgtccgacgtgctgcggctggctttgccgccgcggcacgccaaagccgaggccgag
cccgcttcggaaccggcgccgtcgccggacgtgccggacgtgtcggcgtggtcgcggtac
cagtggggtccggcgttcctggacgccgtggccgacggcaagccggccaacgcggtgtgg
caggccctgccgggcgaagactggccgcgccggctcgcggaggccgcggcggtggcggcg
tcgtgcggccggggcgcggtgctcgtcgtgccggaccatcgggacctcacgcgggtgcac
gaggcgtgcgcggcgctgatgggcgaggacgccgtggtggcgctgatcgccgggctcggg
cccgcggagcggtaccggcgctggctcgccgtgctgcgcggcggcgtccgggtcgtggtg
ggcacgcgcgcggcgatgttcgcaccggtggccgacccgggcctgttcgtcgtgtgggac
gacggcgacgacttgcacctcgacccgcacgcgccttacccgcacgtgcgcgacgtgctc
atggaccgcgcgcacgccacgaagtcgtcgctgctggtcggcggtttcgcgcgcacggcg
gaggcgcagctgctcgtggagtcgggctgggcgcaggccgtgctggccgaccgcgccgag
ctgcgcgcggccgccccgcgggtgacgccggtgggggaggacttcgacgtcgcccgcgac
gaggccgcgcgcgtcgcccgcctgcccgcggtggccttcgaggcggcgcgccaggcgttc
gccgccgggctcccggcgctgatccaggtgccccggcgcggctacgtcccgggcctggcc
tgtggcaactgccgcacgcccgcgcactgccgccgttgcgccggtccgctggcgctgccc
ggcggctcggtggacggcgcgccgaagccgcccgcgtgccgctggtgcggcgtgccggag
accgcgttccattgccaggcttgcggttccgtgcggctgcgcgcggtgatcgtgggcgcg
aagcgcaccgcggaggaattgggccgggccttcccgggcgttcccgtgcgtacttccggc
gcggccgaggtgctggcaacggtgccgggaggccccgcgctggtggtctgcacccccggc
gccgaaccggtcgccgagggcggctacggcgccgccctgctcctcgacggctgggccctg
ctcggccgccaggacctgcgtgccgccgaggaaaccctgcgccgctggatggccgcgggc
gccttggtgcgcccggccgcttcgggcggccggatcgtggtgggcgccgaggccggcctg
tccgtggtccaggccctggtccgctgggacccggcctggcacgccgccttggagctcggc
cagcgccgcgaactgggcttcccgcccgccatgcgcatggccagcgtcgaaggcacgccc
gacgccgtcgcctccgtcctcgacgacctgcccctgcccgacaccggcgaagtcctcggc
cccgtccccctgggcgacttcgacgccgacggcaacgcctcccgcgaacgcgctctggtc
cgtgtggcgcgtccggagggcaaaacgctggccgctctgctccacgacgccgcggcccgc
cgcgacgcccgaaaggcggccgagccggtgcggattcagctggatccgctggagctgatc
tag
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