Amycolatopsis sp. DSM 110486: K1T34_32225
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Entry
K1T34_32225 CDS
T10626
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amyd Amycolatopsis sp. DSM 110486
Pathway
amyd03030
DNA replication
amyd03430
Mismatch repair
amyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K1T34_32225
03430 Mismatch repair
K1T34_32225
03440 Homologous recombination
K1T34_32225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyd03032
]
K1T34_32225
03400 DNA repair and recombination proteins [BR:
amyd03400
]
K1T34_32225
Enzymes [BR:
amyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K1T34_32225
DNA replication proteins [BR:
amyd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K1T34_32225
DNA repair and recombination proteins [BR:
amyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K1T34_32225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QYN17455
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All DBs
Position
6625218..6625955
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AA seq
245 aa
AA seq
DB search
MSWHTGPLAAFDLETTGPKPTDDLIVTGTVWRYSPGEQASDTTLLMDPGVPIPEQATNIH
GITTEHAQRDGIPAGEAVPVLAALLADHVADGAPIVIYNAPFDLTMLERECRRHGVPTLF
DLCARDQLTPYFIDPLVLDRLIDPRRTGSRKLAAVCAHYGVDLSDEDAHTSNGDCLAAAR
LAYRMASRFPKLAAMPLPELQARQTAAYREQAHQFAARAQGMGIVRDVPTEWPYVPARPV
QESLI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggcacacgggcccgttggcggcgttcgacctggagacaaccggccccaagccg
acggacgacctgatcgtgaccggcaccgtctggcggtacagcccaggggagcaggccagc
gacacgacgttgctgatggacccgggcgtgccgatccccgagcaggccacgaacatccac
ggcatcaccaccgaacacgcgcagcgggacgggatccccgccggcgaggcagtgccggtg
ctcgctgcattgctggccgaccacgtcgccgacggcgccccgatcgtcatctacaacgca
ccgttcgacctgacaatgctcgagcgcgagtgccgccgccacggggtgccgaccctgttc
gacctgtgcgcccgcgaccagctgacgccctacttcatcgacccgctcgttctcgaccgg
ctgatcgacccccgccgcaccggatcgcgcaagctcgcggcggtgtgcgcgcactacggc
gtcgacctgtcggacgaggacgcgcacaccagcaacggcgattgcctcgccgccgcgcgg
ctcgcctatcggatggcgtcccgcttcccgaagctcgccgcgatgccgctgccggagctc
caagcacgccagaccgccgcgtaccgggagcaggcgcaccagttcgccgcccgcgcgcag
gggatgggcatcgtccgcgacgtccccaccgaatggccgtacgtgccggcccggcccgtg
caggaatccctcatctag
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