Amycolatopsis sp. DSM 110486: K1T34_43020
Help
Entry
K1T34_43020 CDS
T10626
Name
(GenBank) glycoside hydrolase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
amyd Amycolatopsis sp. DSM 110486
Pathway
amyd00511
Other glycan degradation
amyd00600
Sphingolipid metabolism
amyd01100
Metabolic pathways
amyd04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
K1T34_43020
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
K1T34_43020
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
K1T34_43020
Enzymes [BR:
amyd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
K1T34_43020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BNR_2
BNR
BNR_3
Reelin_subrepeat-B
Tli3
DUF4185
Motif
Other DBs
NCBI-ProteinID:
QYN19329
LinkDB
All DBs
Position
8898957..8900444
Genome browser
AA seq
495 aa
AA seq
DB search
MGLRRFATGVLAAAAAAAGLGALPAAPASADVASTVVFQANTGGYDCFRIPAVVKAHNGD
LLAFAEGRHTGADCADIGDVDVVLKRSKDNGKTWSASTIAVQGFGDTKDNAVPIVLPTGR
VVLLTEMQCVKSAACGRVPRVSYSDDNGATWTAPKALTAQLGFSAAPNWLATGPGHGIVL
QHGAHAGRLVVGMGYQVTPSSPNFGTLIYSDDQGVTWHLGASDQAVDPNTLNPQEISVTE
LADGRIYAAARNDHYSKPADACAIHNRAFAISSDGGATFDKKFAVETGLTTPQVQGSVLE
MSATTAGGAYDRLLFAGPSTCDRRKELRVRSSFDEGGTWTSDANSLLVWGQDASYTDMIS
LGPTSVGLLYEAGPEFQADAGIRWSTVSETQLGAPACGTGYGVIDSAPLGTAGTAYLSYN
AANGQNCVSTMKKTGAGTPSQTSAYLQVEGATRKTDSGAFSYYAGPVSAAAAGKCVQWGG
AIGADKYDSPFEHCG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgggattgagacgtttcgcgaccggggtgctggcggccgccgccgcggccgcggggctg
ggggcgctgcccgccgcgcccgcatcggccgacgtggcgagcacggtggtgttccaggcg
aacaccggagggtacgactgcttccgcattcccgcggtggtgaaggcgcacaacggggac
ctgctcgccttcgccgagggacggcacacgggggccgactgcgcggacatcggtgatgtg
gacgtggtgctcaagcggtcgaaggacaacggcaagacatggagcgcgtcgaccatcgcg
gtgcagggattcggcgacaccaaggacaacgcggtgccgatcgtgctgccgacgggccgg
gtcgtgctgctgaccgagatgcagtgcgtgaagtcggcggcgtgcgggcgggtgccgcgc
gtgagctacagcgacgacaacggcgcgacctggacggcccccaaagcgctcaccgcgcag
ctcggtttctccgccgcgccgaactggctcgcgaccggccccggccacggcatcgtgctg
cagcacggcgcgcacgccggccggctcgtggtcggcatgggctaccaggtgaccccgtcg
agcccgaacttcggcacgctgatctacagcgacgaccagggcgtgacgtggcatctgggc
gcgtcggaccaggccgtcgacccgaacacgctgaacccgcaggagatcagcgtcaccgag
ctcgccgacgggcgcatctacgcggccgcgcgcaacgaccactactcgaagcccgccgac
gcctgcgccatccacaaccgggccttcgcgatcagctccgacggcggggcgacgttcgac
aagaagttcgccgtggagaccggtctgacgaccccgcaggtgcagggctcggtgctggag
atgagcgccacgaccgccggcggcgcctacgaccggctgctgttcgccggaccgtccact
tgcgaccggcgcaaggagctgcgcgtgcgctcgtccttcgacgagggcggcacgtggacg
agcgatgcgaacagcctgctcgtgtggggccaggacgcgtcctacacagacatgatctcg
ctgggcccgacgtcggtcggcctgctgtacgaggccggccccgagttccaggccgacgcc
ggtatccgctggtccacggtgtcggagacccagctcggcgccccggcctgcggcaccggc
tacggcgtgatcgactcggccccgctgggcacggcgggcaccgcgtacctgtcctacaac
gcggcgaacggccagaactgcgtcagcaccatgaagaagaccggcgcgggcacgccgtcg
cagacctcggcctacctgcaggtggagggcgcgacgcgcaagacggactcgggcgcgttc
tcctactacgccggcccggtgtcggcggccgcggcgggcaagtgcgtgcagtggggtggc
gcgatcggcgcggacaagtacgacagccccttcgaacactgcggttga
DBGET
integrated database retrieval system
