Amycolatopsis sp. DSM 110486: K1T34_46865
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Entry
K1T34_46865 CDS
T10626
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
amyd Amycolatopsis sp. DSM 110486
Pathway
amyd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1T34_46865 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amyd03019
]
K1T34_46865 (groL)
03110 Chaperones and folding catalysts [BR:
amyd03110
]
K1T34_46865 (groL)
03029 Mitochondrial biogenesis [BR:
amyd03029
]
K1T34_46865 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amyd04147
]
K1T34_46865 (groL)
Enzymes [BR:
amyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
K1T34_46865 (groL)
Messenger RNA biogenesis [BR:
amyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
K1T34_46865 (groL)
Chaperones and folding catalysts [BR:
amyd03110
]
Heat shock proteins
HSP60 / Chaperonin
K1T34_46865 (groL)
Mitochondrial biogenesis [BR:
amyd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
K1T34_46865 (groL)
Exosome [BR:
amyd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K1T34_46865 (groL)
Exosomal proteins of other body fluids (saliva and urine)
K1T34_46865 (groL)
Exosomal proteins of breast cancer cells
K1T34_46865 (groL)
Exosomal proteins of colorectal cancer cells
K1T34_46865 (groL)
Exosomal proteins of bladder cancer cells
K1T34_46865 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QYN20016
LinkDB
All DBs
Position
9718952..9720601
Genome browser
AA seq
549 aa
AA seq
DB search
MAKDLRFNVEARQLLESGVNALADAVKVTLGPKGRNAVIEKLTGAPTITNDGVTIAKEIQ
LRNPFANMGAQLVKEVAMKTNGVAGDGTTTATVLAQAIVREGLRAVDDGANPQLLKNGIQ
KAVQRVVEVLQAGAREVTEAGDLAHVATLSANNDPEIGDIIAEAMGRVGLGGVVTVEESP
AFGLQVNFVDGMEFDNGYISPYMATDKDRMETVFEDPYILLTNEKISKVQTLMPVLEQVT
RTQKPLVIISENVDGPALGMLVANNVHNTFRSVVVRAPGFGHRRLAELSDLGVFTGGEVV
TGDAGQSIDAVRLEQLGRCRRITVTEGSTTLVGGAGADTAVSARIEQIKRELERAENEHD
QDSLQARIARLSGSVAVIHVGAATEVELREKQHRVEDSLSATRAAIEEGIVAGGGTALVQ
ARAEVDSLDLTGDAAVGRDIVRRALVEPLRWIAINAGYDGDEVLAAVGSSAPGHGFNALT
GEYGDMFEAGVIDPLKVTRSALQSAASIAALLLTTETLVVEEIIQNPGAIIAPGFGDLAE
GMVRPSNIY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggacttgcgcttcaacgtcgaagcccgccagctgctggagtcgggcgtgaac
gcgctcgccgatgcggtgaaggtgacgctcggccccaagggacgcaacgccgtgatcgag
aagctcaccggagccccgacgatcacgaacgacggcgtcaccatcgccaaggagatccag
ctgcgaaacccgttcgccaacatgggcgcgcagctggtgaaggaggtggcgatgaagacc
aacggcgtggcgggcgacggcacgaccaccgccaccgttttggcgcaggcgatcgtgcgc
gaaggcctgcgcgccgtggacgacggcgccaacccgcagctgctgaagaacggcatccag
aaggccgtgcagcgcgtggtcgaggtgctgcaggccggcgcccgtgaggtgacggaggcg
ggcgacctcgcacacgtcgcgacgctttcggcgaacaacgacccggagatcggcgacatc
atcgccgaggcgatgggccgcgtcgggctcggcggtgtggtcaccgtggaggagtcgccg
gcgttcgggctgcaggtgaacttcgtggacggcatggagttcgacaacggctacatctcg
ccctacatggccacggacaaggaccgcatggagacggtcttcgaggacccgtacatcctg
ctcaccaacgagaagatctcgaaggtgcagacgctgatgccggtcctggagcaggtgacc
cggacgcagaagccgctggtgatcatctccgagaacgtggacgggcccgcgctgggcatg
ctcgtggcgaacaacgtgcacaacacgttccgctcggtcgtggtgcgcgcgccgggcttc
gggcaccgacggctcgcggagctgtcggacctcggcgtattcaccggtggcgaggtcgtg
accggcgacgcggggcagagcatcgacgcggtgcgcctggagcagttgggccggtgccgt
cgcatcaccgtcaccgagggcagcaccacgctcgtcggcggtgcgggcgccgacaccgcg
gtgtcggcgcggatcgagcagatcaagcgggagctggagcgcgccgagaacgaacacgac
caggacagcctccaagcacggatcgcgcggctttcgggcagcgtcgcggtgatccacgtc
ggcgcggccaccgaggtcgagctgcgggagaagcagcaccgcgtggaggactcgctgtcg
gccacgcgcgccgcgatcgaggagggcatcgtcgccggcggcggcaccgccctcgtgcag
gcccgtgccgaggtcgacagcctcgacctcaccggcgacgccgccgtgggccgcgacatc
gtccggcgcgcgctggtcgagcccctgcgctggatcgccatcaacgccggctacgacggt
gacgaggtcctcgccgccgtcggctcgtccgctccgggccacggcttcaacgccctcacg
ggcgagtacggcgacatgttcgaggccggcgtcatcgaccccctcaaggtgacccgctcg
gctctgcagagcgcggcgtccatcgcggctctgctgctgaccacggagacgctcgtggtg
gaggagatcatccagaacccgggcgccatcatcgctcccggcttcggtgacctcgcggag
ggcatggtgcggccttccaacatctactga
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