Amycolatopsis sp. DSM 110486: K1T34_52675
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Entry
K1T34_52675 CDS
T10626
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
amyd Amycolatopsis sp. DSM 110486
Pathway
amyd00470
D-Amino acid metabolism
amyd00550
Peptidoglycan biosynthesis
amyd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K1T34_52675 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K1T34_52675 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amyd01011
]
K1T34_52675 (murD)
Enzymes [BR:
amyd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
K1T34_52675 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
amyd01011
]
Precursor biosynthesis
Amino acid ligase
K1T34_52675 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
TrkA_N
LRV_2
POR
Shikimate_DH
ADH_zinc_N
AdoHcyase_NAD
2-Hacid_dh_C
XdhC_C
NAD_binding_7
Pyr_redox
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QYN26643
LinkDB
All DBs
Position
complement(10930648..10932051)
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AA seq
467 aa
AA seq
DB search
MLEGKNVLVAGAGVTGKSVVPVLRELGAHVTVTDGNAERLEELAGLGAELVPGLSAPPPG
TVLVVTSPGWRPTSPLLAAAAAAGVEVIGDVELAWRVGQLRERPPSWLVITGTNGKTTTV
GMLESMLRAGGVDAVACGNVGYAVLDAVRAGHAVLAVELSSFQLHWSSTLAPDASVVLNL
AEDHIDWHGSMEEYGAAKGRAHERSRVVVHNADDEWSTRIAEEHAPESARRVGFRLDTPY
AGELGLVEDLLVDRAFVADPATSAEELATIADVRPAGPHNVANALAAGALARAHGVSPEA
VLKGLREYQPAPHRAQEVAEIGGVRYVNDSKATNPHAAGGSLRAHESIVWIAGGQLKGAA
VDELVASIAGRLRGVVLLGVDSPVIAAAVARHAPDVPVNRLRPGDDEPMTAAVDAASAMA
HPGDVVLLAPAAASLDMFRNYGERGDAFIAAVRVLAGGAAGAANDGS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ctgctcgaaggcaagaacgtgctcgtggccggcgctggtgtcaccgggaagtcggtggtg
ccggtcctgcgggagctgggcgcccatgtgacggtcaccgacggcaacgccgagcggctc
gaagagctggcgggcctcggcgccgagctggtgccgggcctcagcgctccgccgccgggc
accgtgctcgtggtgacgagcccgggctggcggcccacgtcgccgctgctggccgccgcg
gccgccgccggtgtcgaggtgatcggcgacgtcgagctggcctggcgcgtcgggcagctg
cgcgagcggccgccgtcgtggctggtgatcaccggcacgaacggcaagaccaccaccgtc
ggcatgctcgaatcgatgctgcgtgcgggtggcgtcgacgccgtggcctgcgggaacgtc
ggctacgcggtgctcgacgccgtgcgggccggccacgccgtgctcgccgtggagctgtcc
agcttccagctgcactggtcctcgacgctcgcgcccgacgcgtcggtggtgctcaacctc
gccgaggaccacatcgactggcacggctcgatggaggagtacggcgccgcgaagggccgg
gcccacgagcgctcgcgcgtggtcgtgcacaacgccgacgacgaatggtcgacgcgcatc
gccgaggagcacgcgcccgagagcgcccgccgcgtcggattccgcctggacacgccgtac
gccggcgagctggggctggtcgaggacctgctggtggatcgcgccttcgtcgccgatccc
gccacgagcgcggaagagctggcgaccatcgccgacgtccgcccggccgggccgcacaac
gtcgccaacgcgctggccgcaggcgccctcgcgcgcgcccacggcgtgtcgcccgaggcc
gtgctcaaagggttgcgcgagtaccagccggcgccgcaccgcgctcaggaggtcgccgag
atcggcggcgtgcgctacgtgaacgactcgaaagccaccaacccccatgccgcgggcggt
tcgctgcgggcccacgagagcatcgtgtggatcgccgggggccagctcaagggcgccgcg
gtcgacgaactcgtggcctcgatcgctggcaggctgcgcggagttgtgctactcggcgtg
gattcacccgtgatcgcagccgctgttgcgcgacacgcgccggatgtcccggtgaaccgc
ctccgtccgggtgacgatgaacccatgactgcggcggtggatgcggccagcgcgatggct
caccctggtgacgtggtgctgctcgcgcccgccgccgcctcgttggacatgttccgcaac
tacggcgagcgcggcgacgcgttcatcgcggcggtgcgtgtcctcgcgggcggtgcggcg
ggggcggcgaatgacggtagttga
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