Amycolatopsis sp. EV170708-02-1: MJQ72_01565
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Entry
MJQ72_01565 CDS
T10873
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amye Amycolatopsis sp. EV170708-02-1
Pathway
amye03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MJQ72_01565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amye03400
]
MJQ72_01565
Enzymes [BR:
amye01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MJQ72_01565
DNA repair and recombination proteins [BR:
amye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MJQ72_01565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UMP03603
LinkDB
All DBs
Position
393961..394581
Genome browser
AA seq
206 aa
AA seq
DB search
MATKAPGADPPETADLGELRSAASGCRGCDLYRDATQTVFGEGPRAAETMVIGEQPGDQE
DRQGAPFVGPAGRLLDRALGEAGFDRRKIYVTNAVKHFKFKRDERGKRRIHKTPSKTEIV
ACRPWLHAELAAVHPDLLIFLGATAAKALLGDDFRITRSRGERIGLAEFAATAVATVHPS
AVLRAPDRDEAYQAFVADLVAARGAR
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaggcacccggggcggatccgcccgagaccgccgacctgggcgagctgcgt
tcggcggcgtccgggtgccgcggctgcgacctctaccgtgatgccacccagaccgtcttc
ggcgaaggcccgcgcgcggcggagaccatggtgatcggcgaacaacccggtgaccaggag
gatcgccaaggcgccccgttcgtcggacccgcgggacggctgctcgaccgggccctcggc
gaagcgggcttcgaccgccggaagatctacgtcaccaacgcggtcaagcacttcaagttc
aaacgggacgagcgcggcaagcggcggatccacaagacgccgtcgaagaccgagatcgtc
gcctgccgtccgtggctgcacgccgagctggcggcggtccacccggatctgctcatcttc
ctcggcgcgacggcggcgaaggcgctgctgggcgacgatttccgcatcacccgaagccgc
ggcgagcggatcggcctcgccgagttcgccgccaccgcggtcgccaccgtgcacccgtcc
gcggtactgcgcgcgccggatcgcgacgaggcctaccaggccttcgtcgcggatctcgtg
gcggcgcgtggtgcccgctga
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