KEGG   Amycolatopsis sp. EV170708-02-1: MJQ72_01565
Entry
MJQ72_01565       CDS       T10873                                 
Name
(GenBank) UdgX family uracil-DNA binding protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
amye  Amycolatopsis sp. EV170708-02-1
Pathway
amye03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amye00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MJQ72_01565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amye03400]
    MJQ72_01565
Enzymes [BR:amye01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     MJQ72_01565
DNA repair and recombination proteins [BR:amye03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MJQ72_01565
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: UMP03603
LinkDB
Position
393961..394581
AA seq 206 aa
MATKAPGADPPETADLGELRSAASGCRGCDLYRDATQTVFGEGPRAAETMVIGEQPGDQE
DRQGAPFVGPAGRLLDRALGEAGFDRRKIYVTNAVKHFKFKRDERGKRRIHKTPSKTEIV
ACRPWLHAELAAVHPDLLIFLGATAAKALLGDDFRITRSRGERIGLAEFAATAVATVHPS
AVLRAPDRDEAYQAFVADLVAARGAR
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgaccaaggcacccggggcggatccgcccgagaccgccgacctgggcgagctgcgt
tcggcggcgtccgggtgccgcggctgcgacctctaccgtgatgccacccagaccgtcttc
ggcgaaggcccgcgcgcggcggagaccatggtgatcggcgaacaacccggtgaccaggag
gatcgccaaggcgccccgttcgtcggacccgcgggacggctgctcgaccgggccctcggc
gaagcgggcttcgaccgccggaagatctacgtcaccaacgcggtcaagcacttcaagttc
aaacgggacgagcgcggcaagcggcggatccacaagacgccgtcgaagaccgagatcgtc
gcctgccgtccgtggctgcacgccgagctggcggcggtccacccggatctgctcatcttc
ctcggcgcgacggcggcgaaggcgctgctgggcgacgatttccgcatcacccgaagccgc
ggcgagcggatcggcctcgccgagttcgccgccaccgcggtcgccaccgtgcacccgtcc
gcggtactgcgcgcgccggatcgcgacgaggcctaccaggccttcgtcgcggatctcgtg
gcggcgcgtggtgcccgctga

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