Amycolatopsis sp. EV170708-02-1: MJQ72_01590
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Entry
MJQ72_01590 CDS
T10873
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
amye Amycolatopsis sp. EV170708-02-1
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amye03021
]
MJQ72_01590
Transcription machinery [BR:
amye03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MJQ72_01590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
HTH_23
HTH_3
HTH_Crp_2
HTH_IclR
DUF7343
HTH_24
MarR_2
HTH_31
MarR
KORA
GerE
HTH_28
Terminase_5
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
UMP03608
LinkDB
All DBs
Position
396812..397600
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AA seq
262 aa
AA seq
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MSGERKTLTRQADDYAHCEPLFEELSSLPEDSPRRQELRARLVTELLPLAEHIATRFSGR
GEPREDLVQVARIGLINAVDRFDPGRGHDFLSFAVPTVMGEVRRHFRDTGWSVRVPRRLK
ELHVSLSQGTAALSQRLGRAPTPTELAEYLGLEVNDVREGLLAGQAYQTLSVDKPVHDNA
TEALSLADTIGEEDHEMALVETHEALQPLLRELPKRERAILVMRFFGGYTQTQIAERIGI
SQMHVSRLLSQTLEQLRGKLSE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggcgagcgcaagacactcacccggcaggcggacgactacgcccattgcgaaccc
ctcttcgaagaactgtcgtcactgccggaggactctccgcgccgccaagaactgcgtgcc
cgcctcgtcaccgagctcctgccgctcgccgagcacatcgccaccaggttctccggccgg
ggagaaccccgcgaggacctggtgcaggtggcgcggatcggcctgatcaacgcggtcgac
cggttcgaccccggccgtgggcacgatttcctctcgttcgccgtgcccacggtgatgggc
gaggtccggcgtcacttccgggacaccggctggtcggtgcgggtgccgaggcggctcaag
gaactccacgtctcgctcagccagggcacggccgcgctgtcccagcggctcggccgcgcg
ccgacgcccaccgaactcgccgaatacctcgggctcgaggtcaacgacgtacgcgagggg
ctgctggccggccaggcgtaccagacgctgtcggtcgacaaaccggtccacgacaacgcc
accgaggccctctcgctcgccgacacgatcggcgaggaggaccacgagatggccttggtg
gaaacccacgaggcgctgcaaccgctgctgcgggaactcccgaagcgcgaacgcgcgatc
ctcgtcatgcgcttcttcggcggctacacccagacacagatcgcggaacggatcggcatc
tcgcagatgcacgtttcgcggctcctgtcgcagacgctggaacagctgcgcgggaagctc
tcggagtag
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integrated database retrieval system
