Amycolatopsis sp. EV170708-02-1: MJQ72_05115
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Entry
MJQ72_05115 CDS
T10873
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
amye Amycolatopsis sp. EV170708-02-1
Pathway
amye00300
Lysine biosynthesis
amye00470
D-Amino acid metabolism
amye01100
Metabolic pathways
amye01110
Biosynthesis of secondary metabolites
amye01120
Microbial metabolism in diverse environments
amye01230
Biosynthesis of amino acids
Module
amye_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MJQ72_05115 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MJQ72_05115 (dapF)
Enzymes [BR:
amye01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MJQ72_05115 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UMP04239
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All DBs
Position
complement(1146503..1147327)
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AA seq
274 aa
AA seq
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MGGIEFLKGHGTQNDFVLLPDPDGRLELTEARVAALCDRQRGLGADGVLRVVRSAALGVE
SEGEWFMDYRNADGSIAEMCGNGVRVFVRHLVDSGLVSERDFVIGTRAGDRPVRMHADGS
VTVQMGPATITGTSVTVVAGKPFSGVAVNVGNPHLVSVVDDDVDVLDLRDQPDFDSDVFP
DGVNLEFINLLGEDALKMRVHERGVGETRSCGTGTVAAVAAALHLAGTDTGEATVDIPGG
RVVVEVRRGGSTLTGPAEIVARGELDETWWAGLG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcatcgaattcctcaagggacacggcacacagaacgatttcgtgctgcttccc
gaccccgacggccgcctcgagctgaccgaagcgcgggtggccgcgttgtgcgaccgtcag
cgtggtctcggtgccgacggtgtgcttcgtgtcgtgcgctcggccgccttgggggtcgag
tccgagggcgaatggttcatggactaccgcaacgccgacgggtccatcgcggagatgtgc
ggcaacggtgtccgcgtcttcgtccgccacctcgtcgattccgggctcgtgtccgagcgc
gacttcgtcatcggcacccgcgccggtgaccggccggtgcggatgcacgcggacggttcg
gtgaccgtgcagatgggaccggcgacgatcaccggcacctcggtcaccgtggtcgcgggc
aagccgttctccggggtcgcggtgaacgtcggcaatccgcacctggtgtcggtcgtcgac
gacgacgtcgacgtgctcgatctgcgcgaccagcccgacttcgactccgacgtgttcccc
gacggcgtgaacctcgagttcatcaacctgctgggcgaagacgcgctgaagatgcgcgtc
cacgaacgcggcgtcggcgagacgcggtcctgcggcaccggcacggtcgccgcggtcgcc
gccgccctgcacctcgcgggcaccgacaccggtgaggcgaccgtcgacatccccggcggc
cgcgtggtggtcgaggtccgccgaggcggatccacgctgaccgggccggcggagatcgtc
gcgcgcggcgaactcgacgaaacctggtgggccgggctcggttag
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