Amycolatopsis sp. EV170708-02-1: MJQ72_06115
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Entry
MJQ72_06115 CDS
T10873
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
amye Amycolatopsis sp. EV170708-02-1
Pathway
amye00020
Citrate cycle (TCA cycle)
amye00640
Propanoate metabolism
amye00660
C5-Branched dibasic acid metabolism
amye00720
Other carbon fixation pathways
amye01100
Metabolic pathways
amye01110
Biosynthesis of secondary metabolites
amye01120
Microbial metabolism in diverse environments
amye01200
Carbon metabolism
Module
amye_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amye_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MJQ72_06115 (sucD)
00640 Propanoate metabolism
MJQ72_06115 (sucD)
00660 C5-Branched dibasic acid metabolism
MJQ72_06115 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
MJQ72_06115 (sucD)
Enzymes [BR:
amye01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
MJQ72_06115 (sucD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
DapB_N
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
UMP04418
LinkDB
All DBs
Position
complement(1351679..1352557)
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AA seq
292 aa
AA seq
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MAIFLDEHSKVVVAGMTGAEGRKHTARMLAAGTNVVGGINPRKAGQEVHLSGRSLPVFGD
TAEAVAATGADVSVLFVPPPAVKDAVIEAVDAGVGMAVVITEGVPVHDAAAFWAHAQGSP
TRVIGPNCPGVISPGRSNAGIIPDGITKPGRIGLVSKSGTLTYQLMHELREHGFSTCVGI
GGDPIIGTTHIDVVEAFEKDPETDVIVLIGEIGGDAEERAAEYIRARVSKPVVGYIAGFT
APPGKTMGHAGAIVSGTGGTAEAKKKALEAAGIQVGRTPSETAAIVRETLVR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcttcctggacgaacacagcaaggtcgtcgtcgcgggtatgaccggtgccgaa
ggacgcaagcacaccgcgcgcatgctggccgcgggaacgaacgtcgtcggcgggatcaac
ccgcgcaaagccggacaggaggtccacctctccgggcgttctctgcccgtattcggtgat
accgccgaggccgtcgcggcgaccggtgcggacgtctcggtgctcttcgtccccccgccc
gcggtgaaggacgccgtcatcgaagccgtggacgccggagtcgggatggcggtcgtcatc
accgaaggggttccggtgcacgacgccgccgctttctgggcccacgcgcagggaagcccc
acgcgggtgatcgggccgaactgcccgggcgtgatcagccccggccggtccaacgccggc
atcatcccggacgggatcacgaaacccgggcggatcgggctggtctcgaaatccggcaca
ctgacctatcagctgatgcacgaactgcgcgaacacgggttctcgacgtgtgtcggcatc
ggcggcgacccgatcatcggcaccacgcacatcgacgtcgtcgaggcgttcgaaaaggac
cccgagaccgacgtgatcgtgctcatcggcgagatcggtggcgacgccgaggagcgggcc
gccgagtacatccgggcgagggtgagcaaacccgtcgtcggctacatcgccgggttcacc
gcgccaccggggaagacgatggggcacgccggcgcgatcgtgtccgggaccggcggaacg
gccgaagcgaagaagaaggccctggaggcggccgggatccaggtcggccgcacgccgagc
gagaccgcggcgatcgtccgggaaaccctcgtccggtga
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