Amycolatopsis sp. EV170708-02-1: MJQ72_11725
Help
Entry
MJQ72_11725 CDS
T10873
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amye Amycolatopsis sp. EV170708-02-1
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amye03032
]
MJQ72_11725 (topA)
03400 DNA repair and recombination proteins [BR:
amye03400
]
MJQ72_11725 (topA)
Enzymes [BR:
amye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MJQ72_11725 (topA)
DNA replication proteins [BR:
amye03032
]
Prokaryotic type
DNA Topoisomerases
MJQ72_11725 (topA)
DNA repair and recombination proteins [BR:
amye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MJQ72_11725 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
UMP05446
LinkDB
All DBs
Position
2563559..2566456
Genome browser
AA seq
965 aa
AA seq
DB search
MSGEQDSVAGARTKKTAASDDGAGRRRLVIVESPTKARKIAPYLGGNYVVESSVGHIRDL
PRGAADVPAQYKGESWARLGVDVDNDFKALYVVTPDKKSKVTELKGLLKDVDELYLATDP
DREGEAIAWHLLETLKPKVPVRRMVFHEVTEQAIRAAADSTRELDGDLVDAQETRRILDR
LYGYEVSPVLWKKVMPKLSAGRVQSVATRIVVERERERMRFTSASYWDISATMDAGADAS
PRNFPARMIAVDGARLATGRDFGSDGQLKASNNEIRVLAEADAVRLAEALKNRDFKVASV
EEKPYTRKPYAPFMTSTLQQEAGRKLRFTSERTMRIAQKLYENGYITYMRTDSTTLSESA
ISAARSQATQLYGKEYVSPSPRQYTRKVKNAQEAHEAIRPSGEVFRTPGQVAKDLDTDEY
RLYEMIWQRTIASQMADAKGTTMSVRIVGTATSGEEVTFASSGRTITFAGFLKAYVEAVD
TESGGEADDKQSRLPQLVKDQALTATELSPDGHTTSPPARYSEPSLVSKLEELGIGRPST
YASIIKTIQDRGYVWKKGSALVPSWVAFAVIGLMERHFERLVDYDFTAGMEDELDRIAAG
DEHRTQWLSKFYFGGDMGVDGSVGRLGGLKKLVGSGVEDIDAREINSIPLFSDADGHTVV
VRVGRYGPYLEREVDGTSQRANLPEDLPPDELTQDIAEKLFATPQEGRVLGKDPVSGHEI
VAKEGRFGPYVTELLPEPEPLPEGATAAQKKAAKAKQPKPRTGSLFKSMSIETMTLEDAL
KLLSLPRVVGKDPESGDEITAQNGRYGPYLKKGTDSRSLTTEDQLFSITLEEALKIYSEP
KQRGRSATAKPPLKELGDDPVSGKPMVVKDGRFGPYVTDGEYNATLRKSDSIEELTAERG
AELLAEKRAKGPAPKRKAPARKTAASKTTATKTTAAKKTTATKAAGTKTAAAKKPSTRST
ATKTK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagagcaggacagcgtggcaggagcacggacgaagaagaccgcggcgtcggac
gacggcgcgggccgtcgtcggctggtgatcgtcgagtcgccgaccaaggcccgcaagatc
gccccgtacctcggcggtaactacgtcgtggagtcctccgtcggacacatccgcgacctt
ccccgcggcgcggccgacgtgcccgcccagtacaagggcgagtcgtgggcgcggctgggt
gtcgacgtcgacaacgacttcaaggcgctctacgtcgtcacgccggacaagaagtccaag
gtcacggagctgaagggcctgctgaaggacgtcgacgagctctacctcgccacggacccc
gaccgcgagggcgaggccatcgcgtggcatctgctggagacgctcaagccgaaggtcccg
gtgcgccggatggtcttccacgaggtcaccgagcaggcgatccgtgccgcggccgacagc
acccgtgagctcgacggcgacctcgtcgacgcgcaggagacccgccgcatcctggaccgg
ctctacggctacgaggtctcgcccgtgctgtggaagaaggtcatgccgaagctctcggcg
ggccgtgtgcagtccgtggcgaccaggatcgtggtcgagcgggagcgcgagcgcatgcgc
ttcacctcggcgtcgtactgggacatctcggcgacgatggacgccggcgccgacgcgtcg
ccgcgcaacttcccggccaggatgatcgccgtcgacggcgcgcgtctggccaccggccgt
gacttcggctcggacgggcagctcaaggcttccaacaacgagatccgcgtgctggccgag
gccgacgccgtccggctcgccgaggcgctgaagaaccgcgacttcaaggtcgcgagcgtc
gaggagaagccgtacacgcggaagccgtacgcgcccttcatgacctcgaccctgcagcag
gaggcgggccgcaagctgcggttcacctccgagcgcaccatgcggatcgcgcagaagctg
tacgagaacgggtacatcacttatatgcgtaccgactccacgacgctgtcggagtcggcg
atctcggcggcgcgcagccaggcgacgcagctgtacggcaaggaatacgtctcgccgtcg
cctcgccagtacacccgcaaggtgaagaacgcgcaggaagcccacgaggcgatccgtccc
tcgggcgaggtcttccgcacgccgggccaggtcgcgaaggatctggacaccgacgagtac
cgcctttacgagatgatctggcagcgcacgatcgcgtcgcagatggcggacgcgaagggc
accacgatgtcggtgcgcatcgtcggcaccgccaccagcggcgaggaggtcacgttcgcc
tcttcgggccgcacgatcaccttcgccgggttcctcaaggcgtacgtcgaggccgtcgac
accgagagcggtggcgaggcggacgacaagcagagccgcctgccgcagctggtcaaggac
caggcgctgaccgcgaccgagctgagcccggacgggcacaccacgtcgccgccggcgcgc
tactcggagccgagcctggtcagcaagctcgaagagctgggcatcggccgcccgtcgacg
tacgcgtcgatcatcaagaccatccaggaccgcggctacgtgtggaagaagggttccgcg
ctggtgccctcctgggtcgcgttcgccgtgatcggcctgatggagcggcatttcgagcgg
ctggtcgactacgacttcaccgccggcatggaggacgagctcgaccgcatcgccgccggt
gacgagcaccggacgcagtggctgtcgaagttctacttcggcggcgacatgggcgtcgac
ggttccgtcggccgtctcggcgggctgaagaagctggtcggctcgggcgtcgaggacatc
gacgcccgcgagatcaactcgatcccgctgttcagcgacgccgacgggcacaccgtcgtc
gtgcgcgtcggccggtacggcccgtacctcgagcgtgaggtggacgggacgtcgcagcgg
gcgaacctgcccgaggacctgccgccggacgagctgacccaggacatcgcggagaagctc
ttcgcgacgccgcaggaaggccgtgtgctcggcaaggacccggtcagcgggcacgagatc
gtggcgaaggaaggccgcttcggcccgtacgtcaccgagctcctgcccgagccggagccg
cttcccgaaggcgccaccgccgcgcagaagaaggccgcgaaggcgaagcagccgaagccg
cggacgggttcgctgttcaagtcgatgtcgatcgagacgatgactctcgaagacgcgctg
aagctgctctcgctgccgcgcgtggtcggcaaggacccggaatccggcgacgagatcacc
gcgcagaacgggcgctacgggccgtacctgaagaagggcacggactcgcgttcgctcacc
accgaggaccagctgttctcgatcacgctcgaagaggcgctgaagatctactcggagccg
aagcagcgtggccggtccgcgaccgcgaagccgccgctgaaggaactgggcgacgacccg
gtgtccggtaagccgatggtggtcaaggacggccgcttcggtccgtacgtgaccgacggc
gagtacaacgcgacgctgcggaagtcggacagcatcgaggagctgaccgccgagcgcggc
gccgagctgctggcggagaagcgcgcgaagggcccggcgcccaagcgcaaggctccggca
cggaagacggcggcgtcgaagacgacggccaccaagacgaccgcggcgaagaagaccacg
gcgaccaaggccgccgggaccaagaccgcggcggcgaagaagccctcgacccgctcgacg
gctacgaaaacaaagtag
DBGET
integrated database retrieval system
