Amycolatopsis sp. EV170708-02-1: MJQ72_15275
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Entry
MJQ72_15275 CDS
T10873
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amye Amycolatopsis sp. EV170708-02-1
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amye03400
]
MJQ72_15275
DNA repair and recombination proteins [BR:
amye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MJQ72_15275
Archaeal homologous recombinant proteins
MJQ72_15275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
TsaE
AAA_21
NACHT
Spectrin_Anc-1
AAA_22
nSTAND3
DUF724
Motif
Other DBs
NCBI-ProteinID:
UMP06087
LinkDB
All DBs
Position
3272516..3275467
Genome browser
AA seq
983 aa
AA seq
DB search
MRLHRLEVAAFGPYAGREVVDFDALGADGLFLLHGDTGAGKTTLLDAIAFALFGTVPGAR
GEVKRLRCDLAEPDQVTEVVLELTVQGQRMRIARNPEYQRPKRRGEGMTVQQAKAVLSWV
GTVPAGHVAEGITRIDEVARTVERLIGMTHEQFFQVVLLPQGEFARFLRANTAEREELLE
RLFGTERFSDVEHWFANLRAERGRELHARQQTLREWVARFAQVAGQEAPEEGQAEWVGEV
LAESARQLGEAQERDTKARAAAKKAEAVWQENRSTAERIRRVRTAYTRLSVIAEQADQRA
EWAEEVEAAHRAAGVVAEADLLERRLDQLAEAEAAEALRATEVPDAADSSAAELRARAGG
LREEAGALAELVAESEQQHRDLARREQLTAVAVKAEKQAEEFAAELGAAPEKVAALRAEV
AAAAEAEAKLDGARTRVDELTALARDADEMPRVKQAVERARVAVSEAVDAQQLARQHRLD
LRERRLEGMAAELAAGLRAGEDCPVCGATDHPSPATHTGGLVDPEDERRAEIAEQQAHTR
REKAKAVLQEAENRLTVLIERLGEHTAESLWAGLGEARDLVATLSEAARRRPALETRIGA
LERKIEQLTGQRGAAERRAVEIATEVRGLSERLAERERRLESARGEFADVAARRRHLLGF
ATRLDALAEARLSVAGARERRDEQAKLVKEALRAKGFADLDEMRAAARPDEQITKLEASL
ADAKVMERAAREELAQPDLFGISPEDEIDVGASADAAQDTRGEAEQAFAALRTAKTRHTD
LTGLAERVTSLMAELAPVEERYLELRALAEVVNGRGQNARKMSLRSYVLAARLEEVAVAA
TARLRTMSQGRYSFVHSDAAGARGTRGGLGLDVLDDYSGTIRPAKTLSGGESFLASLSLA
LGLADVVAAETGGALLDTLFIDEGFGTLDAETLDIVMNILDELRAGGRVVGLVSHVEELR
QRIPTRLRVRKARTGSSVEIHAA
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccggttggaggtcgccgctttcggtccgtacgcgggccgggaggtggtg
gacttcgacgcgctcggcgccgacggcctgttcctgctgcacggtgacaccggcgcgggg
aagacgacgctgctcgacgcgatcgcgttcgcgttgttcggcaccgtccccggcgctcgc
ggcgaggtcaaacggctgcgctgcgacctcgccgagccggatcaggtcaccgaagtcgtc
ctcgaactgaccgtgcagggccagcggatgcggatcgcgcgcaaccccgagtaccagcgg
cccaagcgccggggcgaggggatgaccgtccagcaggcgaaggcggtgctgagctgggtc
ggcacggtgcccgccggccacgtggccgagggcatcacgcggatcgacgaggtcgcgcgc
acggtcgaacggctcatcggcatgacgcacgagcagttcttccaggtggtcctgctgccg
cagggcgaattcgcgcggttcctgcgcgcgaacacggccgagcgcgaggagcttctggag
cggctgttcggcaccgagcgcttctcggatgtcgagcactggttcgcgaatctgcgtgcc
gaacgcggccgggagttgcacgcccggcagcagaccctgcgggaatgggtcgcgcggttc
gcgcaggtcgctgggcaggaagcacccgaagaggggcaggccgaatgggtcggcgaggtg
ctcgccgagtcggcgcgccaacttggcgaggcgcaggaacgcgacacgaaggcgcgtgcg
gcggccaagaaggctgaagccgtttggcaggagaaccggagcaccgccgagcggatccgc
cgggtgcgcaccgcgtacacgcggctgtcggtgatcgccgagcaggcggaccagcgcgcg
gagtgggcggaagaggtcgaggcggctcatcgcgcggccggggtggtcgcggaagccgat
ctgctcgaacgcaggctggaccagcttgccgaggccgaagccgccgaagctctccgggcc
acggaagtcccggacgccgcggacagctccgccgcggagctgcgcgctcgggccggtggt
ctgcgtgaagaggcgggggcgctcgccgaactcgtggcggaaagcgagcagcagcaccgg
gatctggctcggcgtgagcagctgaccgccgtcgccgtcaaggcggagaagcaggctgag
gagttcgccgccgagctgggcgccgcaccggagaaggtcgcagccttgcgtgccgaggtg
gccgctgccgccgaggccgaggcgaagctcgacggtgcccgcacgcgcgtcgacgagctg
accgcgctggcccgggacgccgacgagatgcctcgggtgaagcaggccgtcgagcgggcg
cgtgtggcggtcagcgaggccgtggacgcccagcaactggcccggcagcaccggctggat
ctgcgggagcggcgtctcgaagggatggcggccgaactcgccgccggtctccgcgcgggt
gaggattgcccggtctgcggggcgacggaccatccgtcgccggcgacgcacaccggcggc
ctggtcgaccccgaggacgaacgccgcgccgaaatcgctgagcagcaggcgcatacgcgg
cgtgagaaggcgaaagccgtgttgcaggaggccgaaaaccgcctgaccgtcctgatcgaa
cggttgggcgagcacaccgccgaaagcctgtgggccgggctcggcgaggcgcgcgacctg
gtcgccacgctgtcggaagccgctcgccggaggcctgcgctcgagacccggatcggtgcc
ctggaacggaagatcgagcagctgaccggccagcgcggggcggccgagcgtcgggcggtc
gaaatcgcgaccgaggtacgcggtctgtcggagcggctggccgaacgtgagcgtcggttg
gagagcgcgcgcggggaattcgccgacgtcgcggcccggcggcggcatctgctcggcttc
gcaacccgactcgacgcgctcgccgaagcacggctgagcgtcgcgggggcaagagaacgg
cgtgacgagcaagcgaagctggtcaaggaagcgttgcgggccaagggtttcgccgatctc
gacgagatgcgtgccgcggcgcggccggacgagcagatcacgaaactggaggccagcctc
gccgacgcgaaggtgatggagcgggccgcccgcgaggaactcgcgcaacccgacctgttc
ggcatctcgccggaggacgagatcgacgtcggcgcttcggcggacgcggcgcaggacaca
cgaggcgaggccgaacaggctttcgcggccctgcggacggcgaagacgcggcacacggac
ctgaccggcctcgccgagcgggtgacgtccttgatggcggagctggcgccggtcgaagag
cggtacctcgaactgagggcgctggccgaagtggtcaacggacgcgggcagaacgcgcgg
aagatgtcgctgcgctcttatgtgctggccgcgaggctggaggaggtcgcggtcgcggcg
accgcgcgcctgcggacgatgagccagggccgctactccttcgtgcactccgacgcggcc
ggggcgcggggcacgcgcggcggcctcgggctcgacgtgctcgacgactactccggcacc
atccggcccgcgaagacgctttcgggcggcgagtccttcctcgcgtcactctcgctggcc
ctggggctcgccgacgttgtcgccgccgaaaccggcggagcgctgctggacacgctgttc
atcgacgagggcttcggcacgctggacgccgagacgctcgacatcgtcatgaacatcctc
gacgagcttcgcgccggcgggcgagtggtcgggctggtttcgcacgtggaggagctgcgg
cagcggatcccgacgcggctacgcgtccggaaggcgcgtacgggctcttcggtggagatc
cacgccgcctga
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