Amycolatopsis sp. EV170708-02-1: MJQ72_17665
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Entry
MJQ72_17665 CDS
T10873
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
amye Amycolatopsis sp. EV170708-02-1
Pathway
amye03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MJQ72_17665 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amye03019
]
MJQ72_17665 (orn)
03009 Ribosome biogenesis [BR:
amye03009
]
MJQ72_17665 (orn)
Messenger RNA biogenesis [BR:
amye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MJQ72_17665 (orn)
Ribosome biogenesis [BR:
amye03009
]
Eukaryotic type
Pre-60S particles
RNases
MJQ72_17665 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UMP06517
LinkDB
All DBs
Position
complement(3759163..3759771)
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AA seq
202 aa
AA seq
DB search
MNDRLVWIDCEMTGLDLGKDALIEIAALVTDAELNVLGEGVDIVIHADDEALDGMPEVVR
EMHARSGLTEEVRRSTVTMEEAEQRVLEYIRAHVPEANVAPLAGNSIATDRGFITRDMPL
LDAHLHYRMVDVSSVKELVRRWYPRIYYAKPEKGLAHRALADIKESIGELDYYRRAAFVP
QPGPTTEQAKAAAAEVQERHER
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaccgcctagtctggatcgactgcgagatgacggggctcgacctcggcaaggac
gcgttgatcgaaattgccgcgctggtgaccgatgccgagctcaacgtcctcggcgaaggc
gtcgacatcgtcatccacgccgacgacgaagccctcgacgggatgccggaggtcgtccgc
gaaatgcacgcccgctccggcctcaccgaagaggtccggcggtccacggtcaccatggaa
gaagccgagcagcgcgtgctcgagtacatccgcgcgcacgtgcccgaggccaacgtcgcc
ccgctcgccggcaactccatcgccaccgaccgcggcttcatcacccgcgacatgcccctt
ctcgacgcgcacctgcactaccgcatggtcgacgtctcgtcggtgaaggaactcgtccgg
cgctggtacccgcggatctactacgccaagcccgagaagggcctcgcgcaccgcgcgctc
gccgacatcaaggaatccatcggcgagctcgactactaccgccgcgccgccttcgtcccg
cagcccggcccgaccaccgaacaggccaaggccgcggccgctgaagtgcaggaacgccac
gaacggtaa
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