Amycolatopsis sp. EV170708-02-1: MJQ72_22815
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Entry
MJQ72_22815 CDS
T10873
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
amye Amycolatopsis sp. EV170708-02-1
Pathway
amye02024
Quorum sensing
amye03060
Protein export
amye03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MJQ72_22815 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MJQ72_22815 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MJQ72_22815 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
amye02044
]
MJQ72_22815 (secD)
Secretion system [BR:
amye02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MJQ72_22815 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
DUF5693
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UMP07510
LinkDB
All DBs
Position
complement(5017593..5019863)
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AA seq
756 aa
AA seq
DB search
MPRETARRGMTGRAVVSLVVLAATVYLLLTTAPRLGLDLRGGTQIVLETKDSPTVTADAE
TTDRTLEVLRRRVDALGVAEPMLARSGDNRIIVELPGVRDPREAVEVIGRTAQLSFHPVL
AAASGDSRVLNDESGQPITLGPAALTGEGVDEARSSVDSQGGGWLVSVDFKGDAGRAWER
LTGQAACSPPGDPARRVAIALDDKVISSPQVSPQVACGVGIVGGSTQITGRFSPAEAKDL
ALLINAGALPTPVEIIEQRTVGPTLGAAAIDASARAAVIGLALTALFLLAVYRLAGLIAV
GALVAYAAVSYAALLAVGATLTLPGLAGFVLAIGMAVDATVLVFERAREEHSVKRGGSLP
RSVSRGFSGALSAIVDSNVTTLLAAGLLFWLASGPVRGFGVTLSIGVVVALFISLVLTRL
LLHLTMRGVVARKPRLSGLTHEGRVRRWVNRRDPEFLGKPKRWLMVAGAVVIAAIAGLFV
AGPNLGVEFTGGRVVEYSTSAPADVERVRDAVSDAGFPRAVVQTSGEKDISVRTEPIDED
ATERIRAAVAGVAGDATEIRDEKIGPSLGAELRTKAMIALGLAVLAQLIYLAVRFDWRLG
LATVAALAQDVLIILGIFAWLGKSMDGVFLAALLTVIGYSVNDSVVVFDRVREVRGQRRK
EPFPRVVGTAVLQTLPRTINTGIGVLFVLGALLVLGDGSLADFALALLLGLVAGTVSTVA
TAGPVAILLDKRWPGAGRPARKANPARQRDDNGAVV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgcgaaaccgcgcggcgaggcatgaccgggcgagccgtcgtctcgctggtcgtt
ctcgccgcgaccgtgtacctgttgctgaccaccgccccgagactggggctcgatctgcgt
ggtggcacgcagatcgtgctggagaccaaggattcgcccaccgtcaccgccgacgcggag
accaccgaccggacactcgaggtgctgcgccgccgggtcgacgccctgggtgtcgccgag
ccgatgctggcccgctcgggggacaaccggatcatcgtcgagctgcccggcgtccgggat
ccgcgcgaggccgtcgaagtgatcggccgcaccgcgcagctgtccttccatcccgtgctc
gccgccgcctctggcgactcacgagtcctcaacgacgagagcgggcagccgatcaccctg
ggacccgccgcgctgaccggcgaaggcgtcgacgaagcgcgctcgtcggtcgattcgcag
ggcggtggctggctggtttcggtcgatttcaaaggggatgccggtcgcgcctgggagcgg
ctgaccgggcaggccgcgtgctcgccgccaggtgatccggcccgccgggtggcgatcgcg
ctcgacgacaaggtgatctcgtcgccgcaggtgagcccgcaggtcgcctgcggggtcggg
atcgtcggcgggagcacgcagatcaccgggcggttctccccggccgaagccaaggatctg
gcgctgctgatcaacgcgggcgcgctgccgaccccggtcgagatcatcgagcagcgcacc
gtcgggcccacgctcggcgccgccgccatcgacgccagtgcccgtgccgccgtgatcggg
ctggcgctgaccgcgctgttcctgctcgcggtgtaccggctggccgggctgatcgccgtg
ggcgcgctggtggcgtacgcggccgtgtcctatgccgcgctgctcgccgtcggcgcgacg
ctgaccttgccggggctcgcaggattcgtgctggccatcggcatggccgtcgatgccacc
gtgctcgtcttcgaacgggcgagagaggaacattcggtcaaacgcggtggttcgctgccg
cgttcggtcagccgcgggttcagcggcgcgttgtcggcgatcgtcgattcgaacgtgacc
accctgctcgccgcgggcctgctgttctggctggcgtccggcccggtgcgcggcttcggg
gtgacgctgtcgatcggcgtcgtcgtcgcgttgttcatctcgctcgtgctcacccggttg
ctgctgcatctcacgatgcggggtgtggtcgcgcgcaaaccgcggctgtccgggctcacc
cacgaaggccgggtccgccgttgggtgaaccgccgcgatcccgaattcctcgggaaaccg
aagcgctggctgatggtggcgggcgcggtcgtgatcgccgcgatcgcggggctgttcgtc
gccgggccgaacctcggcgtcgaattcaccggcggccgcgtcgtcgaatacagcacttcg
gcgcccgccgacgtcgagcgggtccgggacgcggtctccgacgcaggcttcccccgcgcc
gtcgtgcagacctcaggtgagaaggacatctcggtccgtaccgagccgatcgacgaggac
gccaccgaacggatccgggccgccgtcgccggggtcgccggtgacgccaccgagatccgc
gacgagaagatcggcccgagcctcggcgccgaactgcgcaccaaggcgatgatcgcgctc
ggcctcgcggtgctggcgcagctgatctacctcgcggtgcggttcgattggcggctcggc
ctggccacggtggccgcgctcgctcaagacgtcctgatcatcctcgggatcttcgcctgg
ctgggcaaatccatggacggcgtcttcctcgccgcgctgctgacggtgatcggctattcg
gtcaacgactcggtggtggtcttcgaccgggtgcgggaggtacggggacaacgccgcaag
gaaccgttccctcgcgtcgtcggcacggcggtgctgcagacgttgccacggacgatcaac
accgggatcggggtgctgttcgtcctcggggcgttgctggtcctcggggacggctcgctg
gccgacttcgcgctcgcgctcctgctcggcctcgtcgcgggcacggtgtccacagtggcc
accgcggggcccgtcgcgatcctgctcgacaagcggtggcccggggccggacgtcccgcc
aggaaggcgaatccggcacggcagcgggacgacaacggcgcggtggtgtga
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