Amycolatopsis sp. EV170708-02-1: MJQ72_23945
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Entry
MJQ72_23945 CDS
T10873
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
amye Amycolatopsis sp. EV170708-02-1
Pathway
amye03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
amye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MJQ72_23945 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MJQ72_23945 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
AAA_16
RsgA_GTPase
APS_kinase
AAA_25
nSTAND1
AAA_21
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
ScfRs
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UMO99592
LinkDB
All DBs
Position
complement(5273623..5276478)
Genome browser
AA seq
951 aa
AA seq
DB search
MADRLVVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKAH
CPQCGEAISKQTPQQIVDQVLAMEEGTRFQVLAPVVRGRKGEYLDLFENLQQQGYARVVV
DGTIHPLTDPPKLKKQEKHQIAVIIDRLSVKTSSRQRLTDSVETALRLADGLIELEFVDL
PENDPHRVRGFSENLACPNGHPLAIEDLEPRSFSFNAPYGACPDCTGIGVRKEVDPELVV
PDDEMSLGEGAIAPWAGGQSADYFIRLLESLSETIGFRMDTPWRKLPAKVQKAVLHGVDE
QVHVRYKNRYGRQRSYYASFEGVIPFLERRQEQTESEYMRERYEGYMREVPCPACQGTRL
KPEILAVTLEHKTQGDRSIAEVCALSIAEASQFLDELELGKREQVIAGAVLKEIQARLRF
LLDVGLNYLSLDRASGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIE
TLVRLRDLGNTLIVVEHDEDTIRSSDWVVDIGPGAGEHGGHIVHSGPYKKILRNKDSITG
AYLSGRTKIEVPAIRRPIDKKRQLTVVGAREHNLRGLDVSFPLGCLVSVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVNGLANVDKLVRVDQSPIGRTPRSNPATYTGVWDH
VRKLFAATTEAKVRGYQQGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCKGDR
YNRETLEVHYKGKTVSDVLNMPIEEAAEFFEPIKAIHRHLATLVDVGLGYVRLGQPAPTL
SGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDISKLIGVINGLVDKGNTVIVIEH
NLDVIKTSDWIIDMGPEGGSGGGTVIAEGTPEHVASVEESYTGQFLKTVLA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatcgcctcgttgttcgcggcgcccgcgagcacaacctccgcggtgtggatctc
gacctgccccgcgacagcctgatcgtgttcaccggtctgtccgggtccgggaagtcgagc
ctcgccttcgacaccatcttcgccgaagggcagcgccgctacgtcgagtcgctgtcggcg
tacgcgcgccagttcctcggccagatggacaagccggacgtcgacttcatcgagggcctt
tcgcccgcggtgtcgatcgaccagaaatccacgtcgcgcaacccgcgttcgacggtcggc
accatcaccgaggtctacgactacctgcgcctgctctacgcccgcgccggcaaggcgcac
tgcccgcagtgcggcgaggcgatcagcaagcagaccccgcagcagatcgtcgaccaggtg
ctcgcgatggaggagggcactcgcttccaggtgctcgcgccggtcgtgcgcgggcgcaag
ggcgagtacctcgacctcttcgagaacctgcagcagcagggctacgcgcgtgtcgtggtc
gacgggacgatccacccgctgaccgacccgccgaagctgaagaagcaggagaagcaccag
atcgccgtcatcatcgacaggctttcggtgaagaccagctcgcggcagcgcctcaccgac
tcggtcgagacggcgctccggctggctgacggcctgatcgagctggagttcgtcgacctg
ccggagaacgatccgcatcgcgtgcgcggtttctccgagaacctggcctgccccaacggc
cacccgctggcgatcgaagacctcgagccgcggtcgttctcgttcaacgccccgtacggc
gcctgtcccgactgcaccggtatcggcgtccgcaaggaggtcgacccggagctcgtggtc
ccggacgacgagatgtccctcggcgagggcgccatcgcgccgtgggccggcggccagagc
gcggactacttcatccgcctgctcgaatcgctgtccgagaccatcggcttccggatggac
acgccgtggcgcaagctgccggcgaaggtgcagaaggccgtcctgcacggtgtcgacgag
caggtccacgtccgctacaagaaccgctacggccgtcagcgttcgtactacgcgagcttc
gagggtgtcatcccgttcctggagcggcgccaggagcagaccgagtccgagtacatgcgc
gagcggtacgagggctacatgcgcgaggtgccgtgcccggcctgtcagggcacgcggctc
aagccggagatcctcgccgtcaccctggagcacaagacccagggcgaccggtcgatcgcc
gaggtctgcgcgctctcgatcgccgaggcgtcgcagttcctcgacgagctggagctgggc
aagcgcgagcaggtgatcgccggcgccgtgctcaaggagatccaggcgcggctgcgcttc
ctcctcgacgtcggcctcaactacctctcgctcgaccgcgcctccgggacgctgtccggc
ggcgaggcgcagcgcatccggctcgccacgcagatcggctccggtctggtcggcgtgctg
tacgtgctggacgagccgtcgatcgggttgcaccagcgggacaaccaccgcttgatcgag
acactggtccgcctgcgggatctgggcaacacgctgatcgtcgtcgagcacgacgaggac
accatccgctccagcgactgggtggtcgacatcggccccggcgccggtgagcacggtggc
cacatcgtccacagtggaccgtacaagaagatcctgcggaacaaggactcgatcaccggc
gcgtacctgtcgggccgcaccaagatcgaggtcccggcgatccggcgcccgatcgacaag
aagcgtcagctgaccgtcgtcggcgcgcgcgagcacaacctgcgcggcctcgacgtgtcg
ttcccgctcggctgcctcgtgtcggtcaccggcgtctcgggttccgggaagtccacgctg
gtcaacgacatcctcgcgaccgtgctggcgaacaagctcaacggagcgcgccaggtcccg
ggccgtcacacccgcgtgaacggactggcgaacgtggacaagctggtccgcgtcgaccag
tcgccgatcggccgcaccccgcggtccaacccggcgacgtacaccggcgtctgggaccac
gtgcgcaagctgttcgccgcgaccaccgaggcgaaggtgcgcggctaccagcagggccgg
ttctcgttcaacgtcaagggcggccggtgcgaggcctgcgccggtgacggcacgatcaag
atcgagatgaacttcctgccggacgtgtacgtcccgtgcgaggtctgcaagggcgaccgg
tacaaccgcgagaccctcgaggtgcactacaagggcaagaccgtctccgacgtgctgaac
atgccgatcgaagaggcggccgagttcttcgagccgatcaaggcgatccaccggcacctg
gccacgctcgtcgacgtcggcctcggctacgtgcgactcgggcagcccgcgccgaccctg
tccggcggtgaggcacagcgcgtcaagctcgccagcgaactgcagaagcggtccaccggc
aagacggtctacatcctggacgagccgaccaccggcctgcacttcgaggacatcagcaag
ctgatcggcgtgatcaacgggctggtggacaagggcaacacggtgatcgtcatcgagcac
aacctcgacgtcatcaagacctcggactggatcatcgacatgggccccgagggcggttcc
ggcggtggcaccgtgatcgcggagggcacgcccgagcacgtcgcttcggtggaagagagt
tacaccgggcagttcttgaagaccgttctcgcatag
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