Amycolatopsis sp. EV170708-02-1: MJQ72_29660
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Entry
MJQ72_29660 CDS
T10873
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
amye Amycolatopsis sp. EV170708-02-1
Pathway
amye00260
Glycine, serine and threonine metabolism
amye00630
Glyoxylate and dicarboxylate metabolism
amye00670
One carbon pool by folate
amye00785
Lipoic acid metabolism
amye01100
Metabolic pathways
amye01110
Biosynthesis of secondary metabolites
amye01200
Carbon metabolism
Module
amye_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MJQ72_29660 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MJQ72_29660 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MJQ72_29660 (gcvP)
00670 One carbon pool by folate
MJQ72_29660 (gcvP)
Enzymes [BR:
amye01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
MJQ72_29660 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
UMP00627
LinkDB
All DBs
Position
complement(6532230..6535061)
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AA seq
943 aa
AA seq
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MTSTSFDDRHIGPSESEQAKMLAEVGYGSLDALVQAAVPSAIRVTRDLELPPAASEEDAI
AELRALAALNKPMTQMIGLGFHDTVTPAVIRRNVLENPAWYTAYTPYQPEISQGRLEALL
NFQTMVSELAGLATANASLLDESTAVAEAVMLMRRASKAKSNKVVLDAECLPQTIAVVRT
RAEAMGVEVEVRDLLTGLPEEFFGVVVQYPGASGVLRGAGFYSAISETAKAAGALYTVAA
DLLALTLITAPGEFGADIAAGSTQRFGVPLGYGGPHAGFMAVRAGLERSLPGRLVGVSVD
ADGNPAYRLALQTREQHIRREKATSNICTAQVLPAVLAAMYAVYHGPDGLKRIATRVHEL
AAGLAGALRAAGVEVVHEGFFDTVLARMPGQAEAVVAVARENGINLGPVDADHVRIAVDE
VTTPAIIAKVLAAFGVENKAESAQALPAGLGRESEYLTHEVFHSHRSETAMLRYLRGLSD
LDYALDRGMIPLGSCTMKLNATTEMEPISWREFAGIHPFAPADQAEGYHTLVEQLSGWLA
EVTGYDKVSLQPNAGSQGELAGLLAIRAYHHANGQAEREVCLIPSSAHGTNAASAVMAGM
RVVVVKCTDEGNVDLEDLRAKVEANRDTLSAIMVTYPSTHGVYENGIDELAKIVHDAGGQ
VYVDGANLNALLGLAKPGEFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVRAHLAPYLPNH
PLLEKAGPETGVGPISAAPYGSASILPISWAYVRMMGAGGLTAATQVAVLAANYVAKRLN
QHYPVLYTGQDGLVAHECILDLRGLTKETGVSVDDVAKRLIDYGFHAPTMSFPVAGTLMV
EPTESEDLGEIDRFIEAMIAIRAEIDAVAQGKWAADNSPLRNAPHTAETLVGDWDLPYDR
ELAVYPAGVNRKSKYWPPVRRIDGARGDRNLVCSCPPLNAYEN
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
ttgaccagtacgtccttcgacgaccggcacatcggcccctcggagtccgagcaggccaag
atgctcgccgaggtcggctacggcagtctcgatgccctggtacaggccgcggtgccgtcc
gcgatccgcgtcacccgcgacctcgaacttccccccgccgcgtccgaagaggacgccatc
gccgagcttcgcgcgctcgccgcgctcaacaagccgatgacgcagatgatcggcctcggc
ttccacgacacggtcaccccggcggtcatccgccgcaacgtgctggagaacccggcctgg
tacacggcctacacgccgtatcagccggagatctcgcagggccgtctcgaagccctcctc
aacttccagaccatggtctccgagctggccggtctcgccaccgcgaacgcctccctgctc
gacgagtccaccgccgtcgccgaagccgtcatgctgatgcgccgcgcgtcgaaggcgaag
tcgaacaaggtcgtcctcgacgccgagtgcctgccgcagacgatcgcggtcgtccgcacc
cgcgccgaggccatgggcgtcgaggtcgaggtccgcgacctgctcaccggcctgccggag
gagttcttcggcgtcgtcgtccagtacccgggcgcttccggcgtgctgcgcggcgcgggc
ttctactccgccatctccgagacggcgaaggccgccggggcgctgtacaccgtcgccgcc
gacctcctcgccctcacgctgatcaccgcgccgggtgagttcggcgccgacatcgccgcc
ggatccacccagcgcttcggtgtcccgctcggttacggcggcccgcacgccgggttcatg
gccgtccgcgccgggctcgagcgctcgctgccgggccgcctggtcggggtctcggtcgac
gccgacggcaaccccgcgtaccgcctcgccctgcagacccgcgagcagcacatccgccgt
gagaaggccacctccaacatctgcaccgcgcaggtcctgcccgccgtgctcgccgcgatg
tacgcggtctaccacggcccggacggcctcaagcgcatcgcgacccgcgtccacgagctc
gccgccgggctggcgggcgcgctccgtgcggccggcgtcgaggtcgtccacgagggcttc
ttcgacaccgtcctcgcccgcatgcccggacaggccgaagccgtcgtcgcggtcgcgcgg
gagaacgggatcaacctcggcccggtcgacgccgaccacgtccgtatcgcggtcgacgag
gtcaccacgcccgcgatcatcgccaaggtgctcgccgcgttcggcgtggagaacaaggcc
gaaagcgcccaggcgctgcccgccggcctcggccgcgagagcgagtacctcacccacgag
gtcttccactcgcaccgctccgagaccgcgatgctgcgctacctgcgcggactgtccgat
ctggactacgcgctcgaccgcggcatgatcccgctgggctcctgcacgatgaagctcaac
gccaccaccgagatggagccgatcagctggcgcgagttcgcggggatccacccgttcgcg
cccgcggaccaggccgagggctaccacaccctggtcgagcagctgtccggctggctcgcc
gaggtcaccggctacgacaaggtgtcgctgcagccgaacgcgggcagccagggtgagctc
gccggcctcctcgcgatccgtgcgtaccaccacgcgaacggtcaggccgagcgcgaggtc
tgcctgatcccgtcgtccgcgcacggcacgaacgccgcctccgcggtgatggccgggatg
cgcgtcgtcgtggtcaagtgcaccgacgagggcaacgtcgacctcgaagacctgcgggcc
aaggtcgaggccaaccgcgacacgctgtccgcgatcatggtcacgtacccgtccacgcac
ggtgtgtacgagaacggcatcgacgagctggccaagatcgtccacgacgcgggcggccag
gtctacgtcgacggcgcgaacctcaacgccctgctgggtctcgccaaaccgggtgagttc
ggcggcgacgtctcgcacctgaacctgcacaagaccttctgcatcccgcacggtggcggc
ggccccggcgtcggcccggtcgcggtccgcgcgcacctcgcgccgtacctgccgaaccac
ccgctgctggagaaggccggtcccgaaaccggtgtcggcccgatcagcgccgccccgtac
ggctcggcctcgatcctgccgatctcgtgggcgtacgtccgcatgatgggcgctggcggg
ctcaccgcggcgacgcaggtcgccgtcctcgcggcgaactacgtggccaagcgcctcaac
cagcactacccggtgctctacaccggacaggacggcctggtcgcgcacgagtgcatcctc
gacctgcgcgggctcaccaaggagaccggcgtcagtgtcgacgacgtcgcgaagcgcctg
atcgactacggcttccacgccccgaccatgtcgttcccggtcgcgggcacgctgatggtc
gagccgaccgagtccgaggacctcggcgagatcgaccgcttcatcgaggccatgatcgcc
atccgcgcggagatcgacgccgtcgcgcagggcaagtgggccgcggacaacagcccgctg
cgcaacgccccgcacaccgcggagaccctcgtcggcgactgggacctgccgtacgaccgc
gaactggcggtgtaccccgccggggtgaaccgcaagtccaagtactggcccccggtgcgc
cgcatcgacggtgcgcgcggggaccgtaacctcgtctgctcctgcccgccgctcaacgcc
tacgagaactga
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