Amycolatopsis sp. EV170708-02-1: MJQ72_30070
Help
Entry
MJQ72_30070 CDS
T10873
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
amye Amycolatopsis sp. EV170708-02-1
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amye03032
]
MJQ72_30070
03036 Chromosome and associated proteins [BR:
amye03036
]
MJQ72_30070
03400 DNA repair and recombination proteins [BR:
amye03400
]
MJQ72_30070
DNA replication proteins [BR:
amye03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MJQ72_30070
Chromosome and associated proteins [BR:
amye03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MJQ72_30070
DNA repair and recombination proteins [BR:
amye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MJQ72_30070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
UMP00705
LinkDB
All DBs
Position
complement(6617254..6617919)
Genome browser
AA seq
221 aa
AA seq
DB search
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGSKKLPKATAVKRATAGTATRATATRATTT
RTAASRPAATRSTTTRTRAAATTTRAAAKPAAKATATKAAAKTTATKAAPKTAAKATTRA
TTAKKATATKAAAKPAAKATAAKAPAKKAPAKRTSAAAKKK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgcctgggcgacaagaaggtc
gcgtcggaggccgtcgatggccttgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccggcttcggtgtgttcgagaagcgcgcccgcgccgcccgcaccgcg
cggaacccgcgcaccggtgagaccgttcgcgtcaagaagaccaacgtgcccgcgttccgc
gccggcacgaccttcaaggacgtcatcagtggttcgaagaagctgccgaaggccaccgct
gtgaagcgcgcgaccgccggcaccgccactcgtgccaccgccacccgcgcgacgacgacc
cggacggccgccagccgcccggccgcgacgcgttccaccaccacgcggacgcgcgccgcc
gccacgacgacgcgtgccgccgcgaagccggccgccaaggcgaccgcgaccaaggccgcg
gccaagacgaccgcgaccaaggccgcgccgaagaccgccgccaaggccacgactcgcgcc
accacggccaagaaggcgaccgccaccaaggccgccgcgaagccggccgccaaggcgacc
gctgccaaggctcccgcgaagaaggctccggccaagcggacttcggctgccgcgaagaag
aagtaa
DBGET
integrated database retrieval system