KEGG   Amycolatopsis sp. EV170708-02-1: MJQ72_30070
Entry
MJQ72_30070       CDS       T10873                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
amye  Amycolatopsis sp. EV170708-02-1
Brite
KEGG Orthology (KO) [BR:amye00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amye03032]
    MJQ72_30070
   03036 Chromosome and associated proteins [BR:amye03036]
    MJQ72_30070
   03400 DNA repair and recombination proteins [BR:amye03400]
    MJQ72_30070
DNA replication proteins [BR:amye03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    MJQ72_30070
Chromosome and associated proteins [BR:amye03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    MJQ72_30070
DNA repair and recombination proteins [BR:amye03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      MJQ72_30070
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: UMP00705
LinkDB
Position
complement(6617254..6617919)
AA seq 221 aa
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGSKKLPKATAVKRATAGTATRATATRATTT
RTAASRPAATRSTTTRTRAAATTTRAAAKPAAKATATKAAAKTTATKAAPKTAAKATTRA
TTAKKATATKAAAKPAAKATAAKAPAKKAPAKRTSAAAKKK
NT seq 666 nt   +upstreamnt  +downstreamnt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgcctgggcgacaagaaggtc
gcgtcggaggccgtcgatggccttgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccggcttcggtgtgttcgagaagcgcgcccgcgccgcccgcaccgcg
cggaacccgcgcaccggtgagaccgttcgcgtcaagaagaccaacgtgcccgcgttccgc
gccggcacgaccttcaaggacgtcatcagtggttcgaagaagctgccgaaggccaccgct
gtgaagcgcgcgaccgccggcaccgccactcgtgccaccgccacccgcgcgacgacgacc
cggacggccgccagccgcccggccgcgacgcgttccaccaccacgcggacgcgcgccgcc
gccacgacgacgcgtgccgccgcgaagccggccgccaaggcgaccgcgaccaaggccgcg
gccaagacgaccgcgaccaaggccgcgccgaagaccgccgccaaggccacgactcgcgcc
accacggccaagaaggcgaccgccaccaaggccgccgcgaagccggccgccaaggcgacc
gctgccaaggctcccgcgaagaaggctccggccaagcggacttcggctgccgcgaagaag
aagtaa

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