Amycolatopsis sp. EV170708-02-1: MJQ72_30255
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Entry
MJQ72_30255 CDS
T10873
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
amye Amycolatopsis sp. EV170708-02-1
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amye03021
]
MJQ72_30255
Transcription machinery [BR:
amye03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MJQ72_30255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR
HTH_3
HTH_Crp_2
KORA
HTH_24
HTH_31
Sigma70_ECF
DUF7343
MarR_2
HTH_Tnp_4
HTH_28
GerE
HTH_ParB
Phage_antitermQ
HTH_7
Motif
Other DBs
NCBI-ProteinID:
UMP07578
LinkDB
All DBs
Position
complement(6659536..6660321)
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AA seq
261 aa
AA seq
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MPAPRDRRTRRKDDYSHCRAWFDELAALPGGHPDRRRLRERLILELLPVAEHIAVRFSGR
GQPREDLIQVARIGLMKAVDRFDPAQGGDFLAYAVPTVMGEVRRFFRDTGWAVHVPRGMQ
ELRTRLTRATTELTQTLGRAPTPSELAGHLDVDVETVRDGLLAANSYQTSSLDRPVNDGE
GSLPLSDVMGELDSRFEHIEDRHTVVPLLRRLPERERAIVTMRFFEGMTQSQIAERVGIS
QMHVSRLLTKILQDLRGDLTG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccctcgggaccgccggacgcggcggaaggacgactactcgcattgccgcgca
tggttcgacgaactggccgccttgcccggcggtcacccggaccggcggcgcctgcgggaa
cgcctgatcctcgaactgctgccggtcgccgagcacatcgccgtccggttcagcgggcgg
ggccagccgagggaagacctgatccaggtcgcgcggatcggcctgatgaaggccgtggac
cggttcgatcccgcgcagggcggggatttcctggcgtacgcggtgccgacggtcatgggc
gaggtgcggcggttcttccgcgacaccggctgggcggtgcacgtcccgcgcggaatgcag
gaactgcgcacccggcttacgcgggcgacgacggaactgacccagaccctcggccgcgcg
ccgaccccgtccgagctcgccgggcatctcgacgtggacgtcgaaaccgtccgtgacggc
ctgctcgccgcgaacagctaccagacttcgtccctcgaccggccggtcaacgacggcgag
ggctcgcttcccctgtcggatgtgatgggggaactggattcccggttcgagcacatcgag
gaccggcacaccgtggtcccgctgctccggcggctgccggaacgggagcgggcgatcgtc
acgatgcggttcttcgaggggatgacccaatcgcagatcgccgaacgcgtcggtatctcc
cagatgcacgtttcccgcctgctcacgaagatcctgcaggatctgcgcggcgatctcacc
ggctga
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