Amycolatopsis sp. EV170708-02-1: MJQ72_31340
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Entry
MJQ72_31340 CDS
T10873
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amye Amycolatopsis sp. EV170708-02-1
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amye03032
]
MJQ72_31340
03400 DNA repair and recombination proteins [BR:
amye03400
]
MJQ72_31340
Enzymes [BR:
amye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MJQ72_31340
DNA replication proteins [BR:
amye03032
]
Prokaryotic type
DNA Topoisomerases
MJQ72_31340
DNA repair and recombination proteins [BR:
amye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MJQ72_31340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UMP00931
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All DBs
Position
6895758..6896765
Genome browser
AA seq
335 aa
AA seq
DB search
MRLRRADLGSPGIRRRRRGRGFGYLTPDGEPLKDEETIERIEALAIPPAWRRVWISPHEN
AHIQAVGVDDAGRKQYLYHADWRRARDEEKHERVLALARRLPALRRAIQEDLASRGLTRE
RVLAGALRMLDLGVFRTGGENYADENGTHGVATLLCEHVSIRAGCLLCDYPAKGGIRRKV
RLRDDGLVRLIRSLRRARGEEVRLLAYRNGREWQEIRAEDLNERFKELAGDDFTAKDLRT
WNATVLAASAFAETEKPSSERGLKRAEKAVMAEVAEGLGNTPAVARRSYVDPRVITAYRR
DRTIARATRRADKVSDPDEARDIVERAVVRLLNGS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgcggcgagcggatctggggtcccccggcatcaggagacgccgaagaggccgg
ggtttcggatacctgactcccgacggcgaaccgctgaaggacgaggagacgatcgagcgg
atcgaggcgctcgcgatcccgcccgcgtggcggcgcgtgtggatctccccgcacgagaac
gcccacatccaggccgtcggggtcgacgacgccgggcggaagcagtacctctaccacgcg
gattggcggcgggcccgtgacgaggagaagcacgagcgggtcctcgcgctggcgcggcgg
ctccccgcgctccgccgggccatccaggaggatctcgcttcccgcggtctcacccgcgaa
cgggtgctcgccggcgcgctccgcatgctcgacctcggggtgttcaggaccggcggcgaa
aactacgccgacgagaacggcacgcacggggtggcgacgctgctgtgcgaacacgtttcg
atccgggcgggctgcctgctctgcgactatccggcgaagggcgggatccggcggaaggtc
cggctccgtgacgacggcctcgtccggctgatccgctcgctccggcgtgcccgcggcgaa
gaggtacgcctgctcgcctaccggaacggtcgcgaatggcaggagatccgggccgaagac
ctcaacgagcggttcaaggaactcgcgggcgacgatttcacggccaaggacctgcgcacc
tggaacgccacggtcctggccgcttccgctttcgcggagaccgaaaagccttccagcgaa
agaggattgaagcgggcggagaaggccgtgatggccgaagtcgccgaaggtctcggcaac
acgcccgcggtggctcgacggtcctatgtggaccctcgggtgatcaccgcctaccgccgg
gatcggacgatcgcgcgcgcgacgcgacgggcggacaaggtctcggatcccgacgaggcc
cgcgacatcgtggagcgggcggtggtgcggctactgaacgggtcgtga
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