Amycolatopsis sp. EV170708-02-1: MJQ72_37580
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Entry
MJQ72_37580 CDS
T10873
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amye Amycolatopsis sp. EV170708-02-1
Pathway
amye03420
Nucleotide excision repair
amye03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MJQ72_37580 (pcrA)
03430 Mismatch repair
MJQ72_37580 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amye03400
]
MJQ72_37580 (pcrA)
Enzymes [BR:
amye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MJQ72_37580 (pcrA)
DNA repair and recombination proteins [BR:
amye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MJQ72_37580 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MJQ72_37580 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Terminase_6N
AAA_22
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UMP02064
LinkDB
All DBs
Position
complement(8268118..8270526)
Genome browser
AA seq
802 aa
AA seq
DB search
MNTLFDLPADGPAKPRHSDLLDDLNPAQREAVTHAGSPLLVVAGAGSGKTRVLTRRIAYL
LAERDVHPGQIMAITFTNKAAAEMRERVSDLVGRRANAMWVSTFHSMCVRILRREAKTLE
MSSSFSIYDSDDTKRLITLVARDLDIDPKKYAARTLAVHISNLKNELIDPETAVADAGND
LERRVAEVYVEYQRRLNQANAFDFDDLIMRTVELLQTYPDVAEYYRRRFRHVLVDEYQDT
NHAQYTLVRELVGTEANEAGIEPAELCVVGDADQSIYAFRGATIRNIEEFERDFPNARTV
LLEQNYRSTQTILNAANAVIARNPNRRAKRLWTDSGDGEKIVGYVADNEHDEAAFVAGEI
DALADKGEADYSDVAVFYRTNNQSRVFEEIFIRLGLPYKVVGGVRFYERREVRDMLAYLR
VLANPEDTVSLRRILNVPKRGIGDRAEAVIATYAERERISFAQALRGAVNGEVPLLNPRS
AKAITGFVELMDELGEVVESGAEVADILEAVLERTGYRTELEESDDPQDASRVENLTELV
TVAREFTEFTAEVAGPEGELPEAEPGVPEPGSLPAFLERVSLVADADSVPSPDGGDDGEG
HDAGVVTLMTVHTAKGLEYPVVFGTGWEDGIFPHMRALGDPTELAEERRLAYVAITRARK
RLYVSRSMVRSAWGQPQMNPASRFLDELPADLVDWRRLAPSPSSGGFGSSGGSPRAATTW
GSRGGGGGSSSRAASTSPFGKGWKDTVALKLDVGDRVSHDKYGLGTVVACDGAGPRATAT
IDFGAAGKVRLMLIGSVPMVKL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctcttcgatctcccagcggacggtccggccaagccccggcactcggacctg
ctcgacgacctgaacccggcgcagcgcgaggccgtgacccacgcgggctcgccgctgctg
gtcgtcgcgggcgcgggttcgggcaagacccgggtgctgacccgccggatcgcgtacctg
ctggccgaacgggacgtgcaccccggccagatcatggcgatcacgttcaccaacaaggcg
gccgcggagatgcgggagcgggtgagcgacctcgtcggccgccgcgcgaacgccatgtgg
gtgtcgacgttccactccatgtgcgtgcggatcctgcgccgtgaggccaaaacgctggag
atgtcgtcgagtttctcgatctacgactcggacgacacgaagcggctcatcaccctcgtc
gcccgtgatctcgacatcgacccgaagaagtacgcggcgcgcacgctggccgtgcacatc
tcgaacctcaagaacgaattgatcgatccggagacggcggtcgccgacgcgggcaacgac
ctcgaacgccgcgtcgccgaggtgtacgtcgagtaccagcggcggttgaaccaggccaac
gcgttcgacttcgacgacctcatcatgcggacggtcgaactcctgcagacgtatccggac
gtcgcggagtactaccggcggcgcttccggcacgtgctggtcgacgagtaccaggacacg
aaccacgcgcagtacacgctggtccgcgaactggtcggcaccgaggcgaacgaggccggg
atcgagccggccgagctgtgcgtcgtgggtgacgcggaccagtcgatctacgccttccgc
ggcgcgacgatccgcaacatcgaggaattcgaacgcgacttcccgaacgcgcggaccgtg
ctgctggaacagaactaccgctccacccagacgatcctgaacgcggcgaacgcggtcatc
gcgcgaaacccgaacaggcgcgcgaagcggctgtggaccgattcgggggacggcgagaag
atcgtcggctacgtcgcggacaacgagcacgacgaagcggcgttcgtcgcgggcgagatc
gacgcgctggcggacaagggcgaagcggactactccgacgtcgccgtcttctaccgcacc
aacaaccagtcccgtgtcttcgaagagatcttcatccgcctcggcctgccgtacaaggtc
gtcggcggggtgcggttctacgagcggcgcgaggtccgcgacatgctcgcgtacctgagg
gtgctggcgaacccggaggacacggtcagcctgcgccgcatcctcaacgtccccaaacgc
ggcatcggagaccgtgccgaagccgtcatcgcgacgtacgccgagcgcgagcgcatctcg
ttcgcgcaggcgttgcgcggcgcggtcaacggcgaggtgccgttgctgaacccgcgctcc
gccaaggcgatcaccggtttcgtcgagctgatggacgagctcggcgaggtcgtcgagagc
ggcgcggaagtcgccgacatcctcgaagcggtcctggagcgcaccggttatcggacggaa
ctcgaggagtccgacgacccgcaggacgcgtcgcgggtggagaacctgacggaactcgtc
accgtcgcgcgggagttcaccgaattcaccgccgaggtcgccggtccggagggcgaactg
ccggaggccgagccgggtgtgccggagccgggctcgctgcccgcgttcctggagcgggtc
tccctggtggccgacgcggattcggtcccgtcgcccgacggcggcgatgacggcgaaggg
cacgacgcgggcgtggtcacgttgatgaccgtgcacaccgcgaagggcctggagtacccg
gtcgtcttcggaacgggctgggaagacgggatcttcccgcatatgcgtgcgctcggtgac
cccacggagctggccgaagagcgacgtctcgcctacgtcgcgatcacgcgggcgaggaag
aggctgtacgtctcccgttcgatggtgcgctcggcctggggccagccgcagatgaacccg
gcttcgcggttcctcgacgagcttcccgccgacctggtggattggcgcaggctcgcgcct
tccccctcttccggtggcttcggttcgtcgggcggatcgccgcgggccgcgacgacctgg
ggcagccggggcggtggcggcggctcgtcgtcgagggcggcgagcacgagtccgttcggc
aagggctggaaggacaccgtcgcgctcaagctcgacgtcggcgacagggtcagccacgac
aagtacgggctcggcacggtcgtcgcctgcgacggcgcgggcccgcgtgccacggcgacg
atcgatttcggtgccgccggcaaggtccggctgatgctgatcggcagcgtcccgatggtc
aaactctag
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