Amycolatopsis sp. EV170708-02-1: MJQ72_40185
Help
Entry
MJQ72_40185 CDS
T10873
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
amye Amycolatopsis sp. EV170708-02-1
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amye03021
]
MJQ72_40185
Transcription machinery [BR:
amye03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MJQ72_40185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
HTH_3
HTH_24
HTH_31
LacI
MarR_2
HTH_7
HTH_Crp_2
HTH_38
HTH_IclR
PF0610-like_N
HTH_28
HTH_37
HTH_26
HTH_AsnC-type
DUF7343
HTH_Tnp_ISL3
KORA
MarR
CENP-B_N
DUF134
Motif
Other DBs
NCBI-ProteinID:
UMP07663
LinkDB
All DBs
Position
8783568..8784287
Genome browser
AA seq
239 aa
AA seq
DB search
MCALPPNAPEREALRDELVRAHLELARNLARKFRNRDESMEDLVQIATIGLIHAVDRFDP
GQGSDFLAFAVPTISGELRHHFRDNSWSVRVPRRLKELNANISAAREELTVRLSRAPKPS
EIATHLGVPIDEVYEGLRAGQGRYGASLDNLLENSAHTRFGEADANLSQAELREALRPML
ERLPDRERKIVALRFGSGMSQSDIARRVGVSQMQVSRLLAATLKKLREGLTETELTDGA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcgctgcccccgaacgcccccgaacgcgaggcgctgcgggacgagctggtgcgc
gcgcacctcgaactcgcgcgcaatctggcgcgcaagttccgcaaccgggacgagtcgatg
gaggatctggtccagatcgcgacgatcgggctgatccacgccgtcgaccggttcgacccc
ggccagggcagcgacttcctggccttcgcggtccccaccatctccggcgagctgcggcac
cacttccgcgacaacagctggtcggtccgggtgccgcggcggctcaaggagctgaacgcg
aacatctcggccgcgcgcgaggagctgaccgtccggctctcccgcgcgccgaaacccagt
gagatcgccacgcatctcggcgtcccgatcgacgaggtctacgagggccttcgcgccggt
cagggccggtacggggcctcgctggacaacctgctggagaactcggcgcacacccgcttc
ggcgaggcggacgccaatctgagccaggcggagctgcgcgaggcgctgcggccgatgctg
gaacggctgcccgaccgcgagcgcaagatcgtcgcgctgcggttcgggtccgggatgagc
cagtcggatatcgcgcgccgtgtcggcgtttcccagatgcaggtgtcaaggctgctggcc
gccacgctcaagaaactgcgcgaaggattgaccgagacggaactcacggacggagcctga
DBGET
integrated database retrieval system
