Amylibacter sp. IMCC11727: QBD29_01115
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Entry
QBD29_01115 CDS
T08989
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl03030
DNA replication
amyl03430
Mismatch repair
amyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QBD29_01115 (dnaQ)
03430 Mismatch repair
QBD29_01115 (dnaQ)
03440 Homologous recombination
QBD29_01115 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyl03032
]
QBD29_01115 (dnaQ)
03400 DNA repair and recombination proteins [BR:
amyl03400
]
QBD29_01115 (dnaQ)
Enzymes [BR:
amyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QBD29_01115 (dnaQ)
DNA replication proteins [BR:
amyl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QBD29_01115 (dnaQ)
DNA repair and recombination proteins [BR:
amyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QBD29_01115 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WGI22049
LinkDB
All DBs
Position
complement(203844..204533)
Genome browser
AA seq
229 aa
AA seq
DB search
MREIVMDTETTGLDPRTGDRIVEIGGVELDNHLPTGRTYHQYINPQRDMPQGAFDVHGLS
EEFLKDFPVFKDIAQDFLDFVGDAKLVIHNAAFDMKFLNAELEWCEKPQLPWEQAIDTLD
MARRKFPGAQNTLDGLSRRFGINIERDLHGALLDSQILAAVYLELIGGRQPDFALGIVGG
TDTKNVVAGSDWKPHPRPKTLPPRTTEAEKENHKKFIETLGPDALWLNS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatagtgatggatacggaaaccacggggcttgatccgcgcactggggaccgc
atcgtggaaattggcggggtggagctggataaccatttacctactggccgtacctatcac
caatacatcaatccgcaacgggacatgccccaaggggcgttcgatgtgcatggcctctcc
gaagagtttttgaaagactttcctgttttcaaagatatcgcgcaggattttctggatttt
gtcggcgatgccaaattggtgatccacaacgctgcgttcgatatgaaattcctgaacgcc
gaacttgaatggtgtgaaaaaccacaattgccatgggaacaggcgattgacacgcttgat
atggcacggcgcaaatttccaggagcccaaaatacgcttgatggcctgtcacgtcgattt
ggcattaacatcgaacgggatctgcacggcgctcttttggacagtcaaatccttgccgcg
gtgtatctggaattgatcggcggccgccaacctgattttgcgctgggcattgttggggga
acagacacgaaaaacgtggtcgcaggatctgattggaaaccacaccctcggccaaaaaca
cttccgccccggacaaccgaggcggaaaaagagaaccataaaaagtttatcgagactttg
ggtcccgacgcgctttggcttaattcgtag
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