Amylibacter sp. IMCC11727: QBD29_01140
Help
Entry
QBD29_01140 CDS
T08989
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QBD29_01140 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amyl03021
]
QBD29_01140 (rho)
03019 Messenger RNA biogenesis [BR:
amyl03019
]
QBD29_01140 (rho)
Transcription machinery [BR:
amyl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QBD29_01140 (rho)
Messenger RNA biogenesis [BR:
amyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QBD29_01140 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA_25
AAA
NACHT
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WGI22054
LinkDB
All DBs
Position
207627..208904
Genome browser
AA seq
425 aa
AA seq
DB search
MEDNEKVSLSELKAMSPADLLKQAEELEIENASTMRKGDMMFAILKEMAEDGAEISGDGV
LELMQDGFGFLRSPESNYLPGPEDIYVSPEQIRKHSLRTGDTVEGVIKAPDDNSERYFAL
TSVTTINFSNPEDAKHKVHFDNLTPLYPEERLKMEIEDPTIKDKTARVIDLVAPIGKGQR
SLIVAPPRTGKTVILQNIAASIEANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFD
EPATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANA
LQRPKRFFGAARNIEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIVLDRKIADKR
VYPAIDILKSGTRKEDLLVDKGDLTKTFVLRRILNPMGTTDAVEFLLGKLKQTKSNAEFF
DSMNT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaagataacgaaaaagtttccctgtccgaattgaaggccatgagcccagcggatttg
ttgaaacaggcagaagagctggaaatcgaaaacgcgtccacgatgcgtaaaggcgacatg
atgttcgccattttgaaggaaatggccgaagacggagccgaaatctcgggtgatggggtt
ttagaactgatgcaggatggatttggctttttgcggtcccctgaatcaaactatttgcca
ggtcctgaggatatctatgtcagcccagaacaaattcgaaaacattctctgcgaaccggt
gatacagttgaaggtgtgatcaaagcccctgatgataacagtgaacggtacttcgcgctg
accagcgtgacgacgatcaacttctctaatccagaagacgcaaagcataaagttcacttt
gataacctgacaccgctatatcccgaagagcgtttgaagatggagatcgaagatccaacc
atcaaagataaaacagcgcgcgtgattgatttggttgcaccaatcggtaaagggcagcgg
tccttgatcgtggcgccaccgcggacgggtaagacggtgatcttgcaaaatattgcggcc
agcatcgaggcgaaccatcctgagtgttatttgatcgttctgttgattgatgaacgccca
gaagaggtgacagacatgcagcggtcggtgaaaggggaggttgtgtcctctacctttgac
gagcctgccacgcgtcacgttgccgtgtctgagatggtgatcgagaaagcaaaacgtttg
gttgagcataagcgggacgttgtgatcctgctcgactctatcacccgtctgggtcgcgcg
tttaacacggttgtgccgtcttctggtaaggttctgacaggtggtgtggatgcaaacgcg
ttgcaacggccaaaacggttctttggtgccgcgcgaaacatcgaagagggtgggtcgttg
acgatcatcgcgacggcgttgattgaaacaggttcgcgcatggacgaagtgatctttgag
gaattcaaaggcacgggcaacagcgagattgttctggatcgtaagattgcagacaaacgt
gtttatccagccattgatattctgaaatcgggtacgcgcaaggaagacctgttggtcgac
aaaggcgatttgaccaagacgtttgtattgcgccgtattttgaaccccatggggacgaca
gatgcagtggaattcttgcttggaaaattgaagcagacgaagtctaatgcagagttcttt
gattcaatgaatacctaa
DBGET
integrated database retrieval system
