Amylibacter sp. IMCC11727: QBD29_02080
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Entry
QBD29_02080 CDS
T08989
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl03030
DNA replication
amyl03430
Mismatch repair
amyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QBD29_02080 (holA)
03430 Mismatch repair
QBD29_02080 (holA)
03440 Homologous recombination
QBD29_02080 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyl03032
]
QBD29_02080 (holA)
03400 DNA repair and recombination proteins [BR:
amyl03400
]
QBD29_02080 (holA)
Enzymes [BR:
amyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QBD29_02080 (holA)
DNA replication proteins [BR:
amyl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QBD29_02080 (holA)
DNA repair and recombination proteins [BR:
amyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QBD29_02080 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WGI22230
LinkDB
All DBs
Position
391815..392837
Genome browser
AA seq
340 aa
AA seq
DB search
MKLAGGQAAAFLAKPDAGKSAILLYGMDSMRVALKRQQVIKALVGAQAEEEMRLTRIEAA
ELRKEPALVLDGIKAQGFFPGPRVVFVEGAGDGLTAVLETALGEWAEGDATLVVTASSLN
ARSKLRKAFEGDQRAVAIGIYDDPPGRPEIERLAKEAKLGDLPQGAMDALMQLARTLDPG
ELNQTIEKLGLYKYGDNTPITGEDIDACMPATSDANLDDAAHAIAEGRTGDVVPTLKRLS
GQGVNPTALCIAATRHFRTLHAATTHPQGPDTALARARPPVFGPRKDRLARQARRLGANK
VEKALTELMNTDLQLRSSQKPPEMALVERTFIRIAMLQRN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggcaggtgggcaggcggccgcgtttttagcaaagcctgacgcgggcaaatct
gcaattctgctttatggtatggattccatgagagtggcgctgaaacgccagcaagtgatc
aaagcattggttggcgcacaagccgaagaagaaatgcgcctgacccgtatcgaagcggca
gagctgcgcaaagaacccgcattggttttggatggaattaaggcgcaagggtttttccct
ggtccccgcgttgtgtttgttgaaggggcgggggatggcctgacggcggtattggaaaca
gcgctgggtgaatgggcagaaggggatgcaacactggttgtgaccgccagcagtctgaac
gcaaggtccaaactgcgcaaagcatttgagggcgatcaacgcgccgttgctattggtatt
tacgatgacccccccggacggcctgaaattgagcgtttggcaaaagaagccaagcttggc
gatttaccccaaggggcgatggacgcgttgatgcagttggcccgcacgctcgaccctggt
gaattgaaccagacaattgaaaagctggggctgtataaatacggcgataacacgccaatc
acaggcgaagatattgatgcctgtatgcccgccacctcggatgcgaatctggatgatgcg
gcccatgctattgccgaagggcgcacgggtgatgtggttccgacgctgaaacggctgtcg
gggcaaggcgtgaacccaacggccctgtgcatcgcggccacacggcattttcgcacatta
catgcggcgaccacgcacccgcaggggcctgatacggcgctggcacgtgcgcgaccacct
gtgtttgggccgcgcaaagatcggctggcacggcaggctcggcggcttggcgcgaataag
gtggaaaaggcactgaccgaattgatgaacacggatttgcagttgcgatccagccaaaag
ccgccagaaatggcactggtggaacgcacgttcatccgcattgcaatgctacaaaggaat
taa
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