Amylibacter sp. IMCC11727: QBD29_02655
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Entry
QBD29_02655 CDS
T08989
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl00300
Lysine biosynthesis
amyl01100
Metabolic pathways
amyl01120
Microbial metabolism in diverse environments
amyl01230
Biosynthesis of amino acids
Module
amyl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QBD29_02655 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amyl01002
]
QBD29_02655 (dapE)
Enzymes [BR:
amyl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
QBD29_02655 (dapE)
Peptidases and inhibitors [BR:
amyl01002
]
Metallo peptidases
Family M20
QBD29_02655 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WGI22338
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All DBs
Position
516380..517531
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AA seq
383 aa
AA seq
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MSHTPIDAERLTADLIKCASVTPTEGGALVLLEQVLSDAGFVCTRVDRGDVSNLFARWGQ
GANGRTFGFNGHTDVVPVGDEDAWTVDPFGAEVKDGFMYGRGATDMKSGVAAFAAAAIDF
VKMTPPDGSIVLAITGDEEGVAVDGTVALLDWMDANNERMDHCLVGEPTSPNTMGEMMKI
GRRGSMTAYFTATGVQGHSAYPHRAKNPLPAMAQLMATLAAHELDEGTEHFDPSTLAVTT
IDTGNPANNVIPAQCRATVNIRFNDTWTSDALINWLTREMQGVASLFDIEIDMKTQVSGE
SFFTPPGELSALIGKAVKAETGVQPELSTTGGTSDARFVKNHCPVVEFGLVGKTMHQVDE
RVEVAQIHQLKAIYSRILADYFA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcacataccccgattgatgccgaacgcctgaccgctgatttgattaaatgtgcctcc
gttacgcccaccgaaggcggggcgttggtgctgttggagcaggtgttgtcggacgctggc
tttgtctgcacgcgcgttgatcgcggtgacgtttcaaacctgtttgcccgctgggggcag
ggggccaatgggcgcacgtttgggttcaacgggcatacggatgttgtccctgtgggcgat
gaagatgcgtggacggtggacccgttcggagctgaggtcaaagatggtttcatgtacggt
cgcggcgcgacagatatgaaatcgggcgttgcggcgtttgcggcggcggccattgatttt
gtgaaaatgacaccgcctgatgggtcgattgttttggcgatcacaggggatgaagagggt
gtcgcggtggatggtacggttgcgctgctcgactggatggatgcgaacaacgaacggatg
gatcattgtttggtgggggagccaacaagcccgaacaccatgggtgaaatgatgaagatc
gggcgacgtgggtccatgaccgcgtatttcacggcaacgggggtgcaggggcattcggcc
tatccgcatcgcgcgaaaaacccgctgccagcgatggcgcagttgatggccaccttggcg
gcccatgaactggacgaagggacggagcattttgatccatcgacgttggcggtgacaacg
attgatacgggcaaccctgccaataatgtgatcccagcgcagtgtcgtgcaacggtgaat
attcggttcaatgatacttggacatcggatgcgttgatcaattggttgacccgcgaaatg
cagggtgtggccagcctgtttgatatcgaaattgatatgaaaacgcaggtcagcggcgag
agctttttcacgccacctggtgaattgtccgcactgattggtaaagcggtgaaggcggaa
acgggggttcagccagagctgtccacaacgggtggcacatcggatgcgcggtttgtgaaa
aaccactgtcctgtggtggagtttgggctggttgggaagaccatgcaccaagtggacgaa
cgggttgaggtggcgcagattcatcagctgaaggcgatctattcgcgcattctggccgat
tatttcgcgtga
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