Amylibacter sp. IMCC11727: QBD29_04635
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Entry
QBD29_04635 CDS
T08989
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl00071
Fatty acid degradation
amyl00280
Valine, leucine and isoleucine degradation
amyl00310
Lysine degradation
amyl00362
Benzoate degradation
amyl00380
Tryptophan metabolism
amyl00410
beta-Alanine metabolism
amyl00640
Propanoate metabolism
amyl00650
Butanoate metabolism
amyl00907
Pinene, camphor and geraniol degradation
amyl00930
Caprolactam degradation
amyl01100
Metabolic pathways
amyl01110
Biosynthesis of secondary metabolites
amyl01120
Microbial metabolism in diverse environments
amyl01200
Carbon metabolism
amyl01212
Fatty acid metabolism
Module
amyl_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QBD29_04635
00650 Butanoate metabolism
QBD29_04635
09103 Lipid metabolism
00071 Fatty acid degradation
QBD29_04635
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QBD29_04635
00310 Lysine degradation
QBD29_04635
00380 Tryptophan metabolism
QBD29_04635
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QBD29_04635
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QBD29_04635
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QBD29_04635
00930 Caprolactam degradation
QBD29_04635
Enzymes [BR:
amyl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QBD29_04635
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QBD29_04635
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QBD29_04635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
DAO
UDPG_MGDP_dh_N
F420_oxidored
FAD_binding_3
2-Hacid_dh_C
Pyr_redox_2
Sacchrp_dh_NADP
ApbA
Shikimate_DH
RS_preATP-grasp-like
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
WGI22709
LinkDB
All DBs
Position
complement(904826..907027)
Genome browser
AA seq
733 aa
AA seq
DB search
MTDFHYKLDGDIAIITWDCPDKSMNVMSETGFAELDAHIDTVLSDDAIKGAIITSGKDSF
AAGMDLTVLAEWKAKGGDNPAPELMAGIMQGHTVMRKIERAGMDAKTNKGGKPIVAAMTG
TGLGIGLEIPLACHRIFVADNPKAKIGLPEIMVGIFPGGGGTTRLVRKLGVMNASSFLLE
GKTVAPAKAKAAGLIDEVVPADELISSAKAWIESATDADLVKPWDAKGYKMPGGAPYHPA
GFMTYVGATAMVHGKTQGAFPAAKAMLAAVYEGALVPFDDAIRIEARWFTNILMNPSSSA
MINSLFINKGALEKGAVRPKGIDDQSVKKVGVLGAGMMGAGIALVSAMAGIEVVLIDRDQ
EAADKGKAYSEAHADKGIARKKSTPEKKEKLLSLINATTDLNALKGCDLIVEAVFEDVGV
KAEMTKKVEAIVGEDCIFATNTSTLPIGELAKASVRPDQFIGIHFFSPVDKMLLVEIIKG
AETGDRAVAKSLDFVRQIRKTPIVVNDARFFYANRCIIPYGGEANRMVAEGIEPALIENA
AKQLGFPLGPLQLGDETSIDLAEKIMTATKAAMGNAYPASNGDDVVQTLFDLKRLGRKTK
AGFYDYDEKGKRTGLWKGLGDHFEVMEDQPDLEEVQHRLILAQVLEAVRSLEEGVLEDIR
EGDVGAILGWGFMPWSGGPFAWLDIIGSAKAVEICDALAAKHGDRFAAPALLREMGEKGE
SFYGRFGAEAKAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgactgattttcactataaactcgacggcgacatcgccatcatcacatgggattgccct
gataaatctatgaacgtgatgtccgaaacaggctttgccgaactggacgcccacattgat
acggtgctcagtgacgatgctatcaaaggcgcgatcatcacttctggcaaagacagcttt
gccgctggcatggacctcacagtcctcgccgaatggaaagccaaaggcggcgacaatcca
gcccccgaactgatggcgggcatcatgcagggccacacggtcatgcgcaaaatcgaacgc
gcgggcatggatgcgaaaaccaacaaaggcggcaaacccatcgtggccgccatgacaggc
acgggtctgggcatcggcctggaaatcccgctcgcctgtcaccgcatttttgtggccgac
aacccaaaggccaaaatcggcttgcccgaaatcatggttggcatcttcccagggggcggc
ggcacaacccgcctcgtgcgcaaactcggcgtgatgaacgcctcttctttccttttggaa
ggcaagacagtggccccagccaaagccaaagccgctggcctgatcgacgaagtggtccct
gccgatgaactgatctcctctgcaaaagcatggatcgaatccgccacggacgcggacctc
gtgaaaccatgggacgccaagggctacaaaatgccgggtggcgcaccgtaccaccctgct
ggcttcatgacctacgttggtgcaaccgcgatggtgcacggcaaaacacagggcgcgttc
cctgccgccaaagccatgctcgcagccgtctacgaaggcgcactcgtgcccttcgacgac
gccatccggatcgaggcccgctggttcaccaacatcctgatgaacccatcgtcctctgcc
atgatcaactctttgttcatcaacaaaggggcccttgaaaaaggcgcggtgcgtccaaaa
ggcatcgacgatcaatccgtcaaaaaagtcggcgtccttggcgcaggcatgatgggcgct
ggcatcgcgcttgtctctgccatggcaggcatcgaagtggtgctgatcgaccgcgaccaa
gaagctgcggacaaaggcaaagcctattccgaagcccacgccgacaaaggcatcgcacgc
aaaaaatccacacccgagaagaaagagaaacttctttccctcatcaacgccacaacagac
ctcaacgccctcaaaggctgcgacctgatcgttgaagccgtgttcgaagacgtgggcgtg
aaggccgaaatgaccaaaaaagttgaggccatcgttggcgaagactgcatttttgccacc
aacacatccacgcttccaattggcgaattggccaaagcctccgtgcgtcctgatcagttc
atcggtatccacttcttctctcccgtggacaaaatgctgctggtggaaatcatcaaaggg
gccgaaacgggcgaccgcgcggttgcaaaatccctcgatttcgtacgtcaaattcgcaaa
acgccaatcgtggtcaacgatgcgcgcttcttctatgccaaccgctgcatcatcccatac
ggcggcgaagccaaccgcatggtggccgaaggtatcgaaccagcattgatcgaaaacgcc
gcgaaacagctcggcttcccgctcggcccactacagctgggcgatgaaacatccatcgac
ttggccgaaaaaatcatgaccgccaccaaggccgccatgggcaacgcataccctgcctcc
aacggcgacgatgtggtgcaaacgctgttcgatctgaaacgtctgggccgcaaaaccaaa
gcgggcttttacgactacgacgaaaaaggcaaacgcacaggcctgtggaaaggtctcggc
gaccacttcgaagtgatggaagaccagcctgatctggaagaggtgcaacaccgcctgatc
ctcgcccaagttttggaagcggttcgctccttagaggaaggcgttctcgaagacatccgc
gaaggcgacgtgggcgcgatcctcggctggggcttcatgccatggtcaggtggcccgttt
gcatggctcgacatcattggctccgctaaagcggtcgaaatctgcgacgcactggctgcc
aaacacggtgatcgtttcgccgcccccgcactgctgcgcgaaatgggcgaaaaaggcgaa
agcttctacggccgcttcggggccgaagcaaaagccgcctaa
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