Amylibacter sp. IMCC11727: QBD29_04780
Help
Entry
QBD29_04780 CDS
T08989
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QBD29_04780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyl03400
]
QBD29_04780
Enzymes [BR:
amyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
QBD29_04780
DNA repair and recombination proteins [BR:
amyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QBD29_04780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WGI22738
LinkDB
All DBs
Position
complement(934499..935287)
Genome browser
AA seq
262 aa
AA seq
DB search
MDSFSALTALDWHIELGADEAIGDTPVNRYEQAVQPAKGPIPKTGPNSNIKPIDVMPVIP
QVQEAGEDIARILAARCDDLETLRNTIATFEHCALKKGARNLVFSDGNPAARIMVIGEAP
GRDEDQIGKPFVGRAGQLLDKMFAAIDMDRNGTGDSALYITNVMPWRPPQNRDPSDEEIT
MMMPFLERHIAIANPDILVPMGNIACKAILGKTGITRIRGHWTEAFGKPVLPMFHPAGVL
RDPLKKRDCWADLLSLKTRLKT
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggattccttttccgcccttaccgcccttgattggcacatcgaactcggcgcggacgag
gcgattggcgatacgcctgtgaaccgctatgaacaggcagtacaacccgccaaaggccca
attccaaagacgggacccaacagcaacatcaaacctattgatgtgatgcctgtcattccg
caggtccaagaagctggcgaagatatcgcgcgtatccttgcggcccgctgtgatgacctt
gaaaccctgcgcaacaccattgccactttcgaacactgcgccttgaaaaaaggcgcgcgc
aatctggtgttttcagatggcaacccagccgcgcgtatcatggtgatcggcgaagcgccg
ggacgcgacgaagatcagatcggcaaaccctttgtgggacgtgcgggccaactgctcgac
aaaatgttcgccgccatcgacatggatcgaaatggcacaggcgattctgcactttatatc
accaacgtcatgccttggcgcccgccgcaaaaccgcgatcccagtgacgaagaaatcaca
atgatgatgccgttcttggaacgccacatcgccattgcgaaccctgacatccttgtgccc
atgggcaacattgcctgcaaagcgatccttggcaaaacgggtatcacgcgcattcgcggc
cactggaccgaagcttttggcaaacccgtcctgcccatgttccaccctgcaggcgtgctg
cgcgatcccctgaagaaacgcgattgctgggcggacctgctttcgctcaagacacgatta
aagacatga
DBGET
integrated database retrieval system
