Amylibacter sp. IMCC11727: QBD29_05510
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Entry
QBD29_05510 CDS
T08989
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
amyl
Amylibacter sp. IMCC11727
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amyl03009
]
QBD29_05510 (rimO)
Enzymes [BR:
amyl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QBD29_05510 (rimO)
Ribosome biogenesis [BR:
amyl03009
]
Prokaryotic type
ribosomal protein modification factors
QBD29_05510 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WGI22877
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All DBs
Position
complement(1067517..1068929)
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AA seq
470 aa
AA seq
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MSTNPPNLRPDLAPKAKISEPARPNQPKIGMVSLGCPKALVDSERILTRLRAEGYAISPD
YDGAEAVIVNTCGFLDSAKAESLDAIGEALTANGRVIVTGCLGAEPDYIREHHPQILAVT
GPHQYEQVLDAVHTAVPPNPDPFVDLLPAQNVSLTPRHYSYLKISEGCNHKCKFCIIPDM
RGRLASRPAHAILREAEKLVDAGVKELLVISQDTSAYGLDRRHDMNPWKDGEVRSHITDL
ARELGTLGAQNELWVRLHYVYPYPFVRDLIPIMADPSNGLLPYLDIPFQHSHPDVLKRMA
RPAASAKTLDEIAAWREICPDITLRSTFIVGYPGETEAEFQHLLDWLDEAQLDRVGCFQY
ENVDGARSNALPDHVDAEVKQDRWNRFMEKSQAISEAKLEAKVGTTMQVIVDSVEHDGAT
CRTMSDAPEIDGNLFIDEGFEGLNAGDLVSVEVDEASEYDLWGKCLLIKE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaatccaccaaacctccgccctgacctcgccccgaaagccaagatatcggag
cctgcccgcccaaatcagccaaaaatcggcatggtctctctcggctgccccaaggcgctg
gtggacagtgagcgcatcctcacccgattgcgcgccgaaggctacgccatcagtcccgac
tacgacggtgcagaagcggtgatcgtcaacacctgtggctttctcgacagcgccaaagcg
gaatccttggatgccatcggcgaagcgctcacggccaatggtcgcgtcatcgtcacaggc
tgccttggtgcggaacccgattacatccgtgaacatcacccgcaaatccttgccgtcacg
ggcccgcatcaatacgaacaggtgctggacgccgttcacactgccgtgccgcccaacccc
gatcctttcgttgatctgctgcccgcgcaaaacgtctcgttgaccccgcgccattacagc
tatctgaaaatctccgagggctgtaaccacaagtgcaaattctgcatcatcccagatatg
cgcggacggctcgcctctcgccctgcccacgccatcctgcgcgaagcggaaaagctggtg
gacgcaggcgtcaaagaactcctcgtgatctcccaagacacctccgcctacgggctcgac
cgccgccacgatatgaacccttggaaagacggcgaagtccgctcccacatcaccgatctg
gcccgcgaacttggcacgctcggcgcccaaaatgaattgtgggtccgcctccactacgtc
tacccctacccgttcgtgcgcgacctgatcccgatcatggcggacccgtcaaacggcctg
ctgccttacctcgacatcccgtttcagcactcgcatccagacgtgctgaaacgcatggcc
cgccccgccgcgagcgccaaaacccttgatgaaatcgccgcatggcgcgagatttgcccc
gacattacgctccgctccacctttatcgtcggctacccaggagagaccgaggctgagttc
caacacctgcttgattggctagacgaagcccagttagaccgcgtcggctgcttccaatac
gaaaacgtagacggcgcgcgcagcaacgccctgccagatcacgtggacgccgaagtcaaa
caagaccgctggaaccgcttcatggaaaaatcacaagcgatatccgaggcgaaactggaa
gccaaagtcggcaccacgatgcaagtcatcgtagacagcgtagaacacgacggagccacc
tgccgcacgatgagcgatgcgcccgagatcgacgggaacctatttattgatgaagggttt
gaagggttgaacgctggcgatttggttagcgttgaagttgatgaagcaagcgagtatgat
ttgtggggaaagtgtttacttatcaaggaatag
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