Amylibacter sp. IMCC11727: QBD29_06875
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Entry
QBD29_06875 CDS
T08989
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl00020
Citrate cycle (TCA cycle)
amyl00190
Oxidative phosphorylation
amyl00650
Butanoate metabolism
amyl00720
Other carbon fixation pathways
amyl01100
Metabolic pathways
amyl01110
Biosynthesis of secondary metabolites
amyl01120
Microbial metabolism in diverse environments
amyl01200
Carbon metabolism
Module
amyl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amyl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amyl_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
QBD29_06875 (sdhA)
00650 Butanoate metabolism
QBD29_06875 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
QBD29_06875 (sdhA)
00720 Other carbon fixation pathways
QBD29_06875 (sdhA)
Enzymes [BR:
amyl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
QBD29_06875 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
GIDA
Pyr_redox_2
Thi4
FAD_oxidored
HI0933_like
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WGI23137
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All DBs
Position
1336902..1338707
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AA seq
601 aa
AA seq
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MSAYEYVDHTYDVVVVGAGGAGLRATLGMAEQGLKTACISKVFPTRSHTVAAQGGIAASL
SNMGPDNWQWHLYDTVKGSDWLGDTDAMEYLAREAPKAVYELDHYGVPFSRTEEGKIYQR
PFGGHTTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLKNNAEFFIEYFALDLIMTDDGE
CQGVICWKLDDGTIHRFNAKMVVLATGGYGRAYFSATSAHTCTGDGGGMVARQGLPLQDM
EFVQFHPTGIYGSGCLITEGARGEGGYLTNSEGERFMERYAPTYKDLASRDVVSRCMTME
IREGRGIGAEGDHIHLHLNHLPPEALAERLPGISESARIFAGVDVTKEPIPVLPTVHYNM
GGIPTNYWGEVLDPTAKDHDKIFPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAI
KAGEIVDPKSANRDLNMASVEAAMDRFDATRNASGSTTTADLRLEMQKNMQADAAVFRTD
KTLAEGLEKMKGVAAKLDDISVTDRSMVWNTDLMETLELQNLMPNALATIAGAEARKESR
GAHAHEDYPDRDDKKWRKHTLARVDGNKVKLTYRDVHIDPLTAEKDGGIELKKIAPKARV
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacgaatatgtagatcacacttatgatgttgttgttgtcggcgctggtggc
gctgggctgcgtgccacgcttggcatggccgaacagggtctgaaaaccgcctgtatctcc
aaggtgttcccaacacggtctcacactgttgcggcccaagggggcatcgcggcgtccctg
tcgaacatgggtccagacaattggcaatggcacctatatgacacggtcaaaggttccgat
tggctcggcgacacagatgcgatggaatatctggcgcgtgaagccccaaaggcggtttac
gagcttgatcactacggggtgccgttttcacgcaccgaagagggcaagatttaccaacgc
ccatttggcggccacaccaccgaatttggcgaaggcccgcccgtacaacgcacctgcgcc
gctgcagaccggacaggtcacgcgatcctgcacacgctgtacggccaatccctgaaaaac
aacgcggaattctttatcgaatacttcgcgcttgatctgatcatgaccgacgatggcgaa
tgccaaggtgtgatctgctggaaactcgacgacggcacaatccatcggttcaacgcaaaa
atggttgttctggccacgggtggctatggccgcgcctatttcagcgccacatccgcgcac
acctgcacaggtgacggcggaggcatggtggcccgtcagggcttgccgctgcaagacatg
gaattcgtgcaattccaccccacaggtatttacggctcaggctgtttgattaccgaaggg
gcacgtggggaagggggctatctcaccaactccgaaggcgaacgtttcatggaacgctat
gcgccaacgtacaaagacctcgcatcccgtgatgttgtatcccgctgtatgaccatggaa
atccgcgaagggcgcggaattggggctgaaggggatcacatccacctgcacctcaaccac
ctgccacccgaagccttggccgaacgtctgcctggtatttccgaatccgcgcgtatcttt
gcgggtgtggacgtgaccaaagagccgatccctgtgctgccaactgtgcattacaatatg
ggcggcattccaacaaactattggggcgaggtgctcgatccaacggcaaaagaccacgac
aagattttcccgggcctgatggctgtgggcgaagcaggctgtgcctccgttcatggggca
aaccgtcttggctccaactcgctcatcgaccttgtggtgtttggccgcgcagccgcgatc
aaagcgggtgaaatcgttgatccaaaatccgcaaaccgcgacctgaacatggcaagcgtt
gaggccgcgatggatcgttttgatgcaacccgcaacgcatcaggcagcacaacaacggct
gacctgcgcttggaaatgcaaaaaaacatgcaggcagatgcagcagtgttccgcaccgat
aaaacgttggcagaaggcctcgaaaagatgaaaggtgttgcagccaaacttgatgacatc
tctgtcacagaccgctccatggtttggaacacagacctaatggaaacgctggaactgcaa
aacctgatgccaaatgcgttggccaccattgcaggggcggaagcccgcaaagaaagtcgt
ggcgcacacgcacacgaagattacccagatcgcgacgataaaaagtggcgcaaacacacg
ctcgctcgtgtggatggaaacaaggtaaagctgacgtaccgagatgttcacatcgatcct
ctgaccgcagaaaaggacggcggaatcgagctgaaaaagatcgcaccaaaggcacgtgtc
tactaa
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