Amylibacter sp. IMCC11727: QBD29_08010
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Entry
QBD29_08010 CDS
T08989
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl00550
Peptidoglycan biosynthesis
amyl01100
Metabolic pathways
amyl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QBD29_08010 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QBD29_08010 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amyl01011
]
QBD29_08010 (mrdA)
Enzymes [BR:
amyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QBD29_08010 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
amyl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
QBD29_08010 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WGI23357
LinkDB
All DBs
Position
complement(1577859..1579757)
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AA seq
632 aa
AA seq
DB search
MRRPQKPGRLRQMLTRRAIVLAGMQAGVIGTLGWQMRRISVEQNQSFRLLAEENRVNIRL
IPPVRGLVFDRLGKPLAYNEPNYKIEMVREQADDPEAVLRRLATIVPITDEDIALALEEM
RKRRGFVPVTVAQDLDWEHIAAVSANAPALPGISPELGHYRIYPQADDFAHIMGFVGPVS
DYDLSRTDDDDPLLLIPRFQIGKNGIEKQIEKPLRGKAGVKRIEVNSIGRVMRVLGREES
KAGVNVQLTIDHRLQKYALERLGDDSASAVVMDVRNGDLLTIASAPSFDPNKFVRGISVA
DFKELNENKYKPMLNKAITGTYPPGSTFKMVTALAALKGGFMTPNEKVRCNGYIELYNRR
FHCWRRGGHGRMGLHDSLKQSCDVYYYEVAQKVGIENISAMAKQLGLGVKHDLELPAVRE
GSAPTKAWKKARKDAEWVIGDTLNASIGQGFVLSSPMQLAVMAARLGTGTQISPRLVNAI
DNRPQPVKGREPLDIDPDHIEAVQKAMFAVVNERGGTAAGSAIKRKDWKMAGKTGTSQVR
FITKEERARGVIRNEDLPWERRDHALFVAYAPADNPRFAISVVVEHGGGGSKAAAPIARD
IMQKALELGEDNGYRALPTDVRAGRPIKDDKA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcccacaaaaaccaggacgcttgcgccaaatgctgacgcgccgtgccattgtg
ttggcagggatgcaggcgggcgtgatcggcacgcttggctggcagatgcggcgtatttcg
gtggagcagaaccaatcgtttcgcctgcttgccgaagaaaaccgtgtgaacattcgcctg
atcccacctgtgcgcggattggtgtttgatcgattgggcaagccgctggcgtataacgaa
ccgaactataagatcgaaatggtacgcgaacaggccgatgaccccgaagccgtattgcgc
cgtttggccacgattgtcccaatcacggacgaagatatcgcgctggcgttagaagaaatg
cgcaagcggcgcggatttgttcctgtaactgtggcgcaggatttggattgggaacacatc
gccgccgtgagtgccaatgcacccgcgctgccaggaatttcgcccgagttagggcactat
aggatctatccgcaagctgatgattttgcgcacataatggggtttgttggccccgtttcc
gactatgatctgagccgaacagatgatgatgatccgttgctgctgatcccgcggtttcag
atcggtaagaacggtattgaaaagcagattgagaaacccctgcgcggcaaggcaggtgtg
aaacggattgaagtcaattcaatcggtcgtgtgatgcgcgttttgggccgtgaagaaagc
aaagctggcgtcaatgttcagctgaccattgatcaccgattgcagaaatatgcgttggaa
cggttgggagatgacagcgcgtctgctgtggttatggatgtgcgcaacggggatttgttg
accattgcctctgcgcccagtttcgaccccaacaaattcgtgcgcgggatttctgtagcc
gactttaaagagctgaatgaaaacaaatacaaacccatgctgaacaaggcgatcacgggg
acgtatccccccggatcgacgttcaagatggtaacggcgctggccgcgttgaaggggggc
tttatgacccccaacgaaaaagtacgctgtaatggatatattgagctttataatcggcgg
ttccattgctggcggcgcggtggtcacgggcgtatggggctgcatgacagcctgaagcaa
tcctgtgatgtgtattattacgaagtggcgcagaaggtggggattgaaaacatctcggcc
atggcaaagcagctgggtctgggtgtgaagcacgatctggagctgcccgcggtgcgcgag
ggatcggcccccacaaaggcatggaaaaaagcccgcaaagatgcggagtgggtgatcggg
gatacgttgaatgcgtcgattggacagggatttgtgctgtcttcgcccatgcaactggcg
gtgatggccgcgcggttggggacagggacacaaatttcgccccgattggtgaatgccatt
gataaccgcccacagcccgtaaaggggcgtgagccattggatattgatcccgaccacatt
gaagccgtgcaaaaggccatgtttgccgtggtgaatgagcgtggcggcacagcggcggga
tctgcgatcaaacgaaaagattggaagatggcggggaaaaccggcacgtcacaggtgcgg
tttatcaccaaagaagagcgcgcacgcggcgtgatccgcaatgaggatttgccgtgggaa
cggcgcgatcatgcgttgtttgtggcctatgcccctgcggacaatccacggtttgccatt
tcagtggttgtagaacacggcggtggcgggtccaaggcagccgcgccgattgcgcgtgat
atcatgcaaaaggcgctggagctgggggaagacaacggctatcgcgcgttgcccacggat
gttcgcgcggggcgtccgatcaaggatgacaaagcatga
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