Amylibacter sp. IMCC11727: QBD29_08555
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Entry
QBD29_08555 CDS
T08989
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
QBD29_08555 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amyl01007
]
QBD29_08555 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amyl03016
]
QBD29_08555 (serS)
Enzymes [BR:
amyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
QBD29_08555 (serS)
Amino acid related enzymes [BR:
amyl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
QBD29_08555 (serS)
Transfer RNA biogenesis [BR:
amyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
QBD29_08555 (serS)
Prokaryotic type
QBD29_08555 (serS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
HAUS5
DUF7835
DUF2981
Motif
Other DBs
NCBI-ProteinID:
WGI23463
LinkDB
All DBs
Position
complement(1686821..1688113)
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AA seq
430 aa
AA seq
DB search
MHDIRLIRENPEGFDAALAKRGLAPLSSQILEIDESRRAKITAAETALADRNAASKQVGA
AKAQGLEEEFERLRALVADKKAQIGILEDEAKDEDERLQELLATIPNLPHDDVPEGADEE
DNVEIHRWGTPVELDFEAKEHYDLPAVQGSMDFETAAKLSGSRFVVMSGAVARAHRALAQ
FMIDTHTSENGLTEVNTPVLVRDEAMHGTGQLPKFAEDSYQTTNGWWLIPTSEVTLTNLV
AGEMVDEDTLPRRYTAHSLCFRSEAGSAGRDTSGMLRQHQFEKVEMVSVTKPEDSLAELD
RMTDCAQGILERLELPYRTVVLCTGDMGFGARKTHDIEVWLPGQNTYREISSCSVCGDFQ
ARRMNARFKRAGEKKPEFVHTLNGSGLAVGRCLIAVLENGQQADGSVELPKALHPWLGGK
TRINADGQMA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacattcgactgatccgtgaaaaccctgaagggttcgatgccgcactggcaaag
cgtggattggccccgttgtcgtcccaaatcctcgaaatcgacgagagccgtcgcgccaaa
atcaccgccgctgaaaccgcgcttgcggatcgcaacgctgccagcaaacaggtcggtgcc
gccaaagcccaaggtttagaagaagaattcgaacgccttcgcgcccttgtggccgacaaa
aaggcccaaatcggcattttggaagacgaagccaaagacgaagatgaacgcctgcaagaa
ttgctcgcaaccatcccgaacttgccacatgacgatgttccagaaggggccgacgaagaa
gacaacgtcgaaatccaccgctggggcacgcctgtcgaactcgatttcgaagcaaaagag
cattacgacctgcccgccgtccaaggcagcatggatttcgaaaccgccgccaaactgtct
ggctctcgtttcgttgtcatgtctggtgctgtggcgcgtgctcaccgcgcacttgcacaa
ttcatgatcgacacgcacacttcagaaaacggcctgacagaggtaaacacccctgttctg
gttcgtgacgaagcgatgcacggcacagggcaactcccgaaattcgccgaagacagctat
caaacaaccaacggctggtggctgatccccacatccgaagtcacgctcacaaacctcgtg
gctggcgaaatggtggacgaagacaccctgccccgccgttataccgcgcattccttatgc
ttccgctccgaagcaggcagcgcgggccgtgacacatctggcatgttgcgccagcaccaa
ttcgaaaaagtcgaaatggtcagcgtcaccaaacccgaagacagccttgccgagttggac
cgtatgacagactgcgcccaaggtattttggaacgtctggaactgccctaccgcacggtt
gttctgtgtacgggtgacatgggctttggcgcgcgcaaaacccacgacatcgaagtctgg
ttgccgggccaaaacacctaccgcgagatcagctcttgctcagtctgtggcgatttccag
gcccgccgcatgaatgcccgcttcaaacgcgcaggcgagaaaaagccagagtttgtccat
acactcaacggctctggccttgctgtgggccgttgcttgatcgcagtgctggaaaacggc
caacaggccgatggctctgtggaattgccaaaggcactccacccttggcttggcggcaaa
actcgcatcaacgccgatgggcaaatggcctga
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