Amylibacter sp. IMCC11727: QBD29_12545
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Entry
QBD29_12545 CDS
T08989
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
amyl
Amylibacter sp. IMCC11727
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amyl03021
]
QBD29_12545 (rpoH)
Transcription machinery [BR:
amyl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QBD29_12545 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_3
HTH_11
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
WGI20936
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Position
complement(2476667..2477566)
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AA seq
299 aa
AA seq
DB search
MGYSNLPAPSPEQGLNRYMQEIRKFPMLEPDEEYMLGKAWIDHEDTDAAHKLVTSHLRLA
AKIAMGYRGYGLPTAEVISEANVGLMQAVKRFEPEKGFRLATYAMWWIRASIQEYILRSW
SLVKMGTTSAQKKLFFNLRKAKNRIGALEEGDLRPENLKRIANDLNVTEAEVVSMNRRMS
GGDASLNARVGGEDSDGAAEWQDWLEDETADQATSYAESDELQARRALMVEAMDVLNDRE
KDILAKRKLQDKPVTLEELSSEYDVSRERIRQIEVRAFEKLQEKMREMAVEKGMLKEPA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgggttattcaaatcttccagcgccaagcccggaacagggtttgaaccgctacatgcaa
gaaattcgtaagtttccaatgctggaacctgacgaagaatacatgctgggtaaggcatgg
attgatcacgaagacacggatgctgcgcataaactggtgacaagccacctgcgtttggca
gccaaaattgccatgggctaccgcggctatggcttgcccacggccgaggtgatttccgag
gcgaacgtgggtttgatgcaggctgtgaaacggtttgagccagaaaaaggcttccgtttg
gcgacctacgccatgtggtggatccgtgcgagcatccaagaatacatcttacgcagctgg
tcgctggtgaaaatgggcacaacatcggcccaaaagaagttgttctttaacctgcgcaaa
gccaaaaatcgtattggtgctttggaagagggggacttgcgccccgagaacctgaagcgg
atcgccaatgatctgaatgtaaccgaagccgaagtggtttccatgaaccgtcgtatgtcg
gggggcgatgcgtccctgaacgcccgcgtgggtggcgaagacagcgatggggcggcggaa
tggcaggattggttggaagatgaaaccgccgatcaggctacatcctatgccgaaagtgac
gaactgcaggcccgtcgtgccctgatggttgaagcgatggatgtgctgaatgaccgcgaa
aaggacattttggccaaacgcaaattgcaagacaagccggtaacactggaagagttgagt
agtgaatatgatgtcagccgcgaacgtatccgccaaatcgaagtgcgcgcgtttgaaaag
ctgcaagagaaaatgcgtgaaatggccgttgaaaaaggtatgctgaaagaacctgcttaa
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