Amylibacter sp. IMCC11727: QBD29_12985
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Entry
QBD29_12985 CDS
T08989
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QBD29_12985 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amyl03019
]
QBD29_12985 (groL)
03110 Chaperones and folding catalysts [BR:
amyl03110
]
QBD29_12985 (groL)
03029 Mitochondrial biogenesis [BR:
amyl03029
]
QBD29_12985 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amyl04147
]
QBD29_12985 (groL)
Enzymes [BR:
amyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
QBD29_12985 (groL)
Messenger RNA biogenesis [BR:
amyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
QBD29_12985 (groL)
Chaperones and folding catalysts [BR:
amyl03110
]
Heat shock proteins
HSP60 / Chaperonin
QBD29_12985 (groL)
Mitochondrial biogenesis [BR:
amyl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
QBD29_12985 (groL)
Exosome [BR:
amyl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QBD29_12985 (groL)
Exosomal proteins of other body fluids (saliva and urine)
QBD29_12985 (groL)
Exosomal proteins of breast cancer cells
QBD29_12985 (groL)
Exosomal proteins of colorectal cancer cells
QBD29_12985 (groL)
Exosomal proteins of bladder cancer cells
QBD29_12985 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WGI23551
LinkDB
All DBs
Position
complement(2563325..2564974)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVKFGTDARNRMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELEGKFENMGAQMVKEVASRTNDTAGDGTTTATVLAQAIVKEGMKSVAAGMNPMDLKRGI
DTAVSNVVDAIKSMAREVKDSDEVAQVGTISANGEAAIGSQIADAMQRVGNEGVITVEEN
KGLETETDVVEGMQFDRGYLSPYFVTNPDKMTTELDDALILLHEKKLSSLQPMVPLLETV
IQSSKPLVIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAVLTGGQV
ISEDLGMKLENVGMEMLGTAKKIQITKDETTIIDGAGEKAEIEARVAQIRGQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALNATRAAVQEGVVVGGGVALV
QAVKGLAGMEGANADQTAGISIVRRALEAPLRQIAENAGVDGAVVAGKVRESDDTSFGFN
AQTEEYGDMFSFGVIDPAKVCRTALEDAASIAGLLITTEAMVADKPSEGGAAGGGMPDMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgtaaaattcggcaccgacgcacggaaccgcatgctggaaggcgtg
aatgttctggctgatgctgtaaaagtaacgctgggcccaaaaggccgtaacgttgttttg
gacaaatcctttggcgcaccgcgcatcaccaaagatggtgtatccgttgccaaagagatc
gaacttgaaggcaagttcgaaaacatgggcgcgcagatggtgaaagaagttgcttctcgc
acaaacgacacagcaggcgacggtacaacaaccgcgactgttctggcacaggccatcgta
aaagaaggcatgaaatctgttgctgctggcatgaacccaatggacctgaagcgcggtatc
gacactgctgtttctaacgttgtggacgccatcaaatccatggcacgcgaagtaaaagac
agcgacgaagttgcacaagttggtacaatttctgccaacggcgaagccgcaatcggttca
caaatcgctgacgcaatgcagcgtgtgggcaacgagggcgttatcactgttgaagaaaac
aaaggtctggaaacagaaacagacgttgttgaaggtatgcagttcgaccgcggttacctg
tctccatactttgtgacaaacccagacaaaatgacaactgagctcgacgatgcgttgatc
ctgttgcacgagaagaaactgtcttctttgcagccaatggttccactgctcgaaacagtt
atccaatccagcaagccacttgtcatcattgcagaagatgttgaaggcgaagcgctggca
actttggttgtgaacaaactgcgcggcggtctgaaaatcgcagctgttaaagcacctggt
ttcggcgatcgtcgtaaagccatgttgcaagacatcgctgttctgactggcggccaagtg
atttccgaagacctcggcatgaagttggaaaatgttggcatggaaatgctcggcactgcg
aagaaaatccagatcaccaaagatgaaacaacaatcatcgatggcgctggcgaaaaagca
gagatcgaagcccgtgttgcacaaatccgtggccagatcgaagaaacaacttccgactac
gaccgtgaaaaactgcaagagcgtctggccaaattggctggtggtgttgctgtgatccgc
gttggtggttccacagaagttgaagtgaaagagcgcaaagaccgcgttgatgatgccctg
aacgcgacacgtgccgctgttcaagaaggtgttgttgttggtggcggtgttgcactggtt
caggctgttaaaggcttggctggcatggaaggcgcaaacgctgaccagactgctggtatt
tccatcgtgcgtcgcgcattggaagcgccactgcgtcagatcgctgaaaacgctggtgtt
gacggtgcagttgttgcgggcaaagtccgcgagagcgacgacacatcctttggctttaac
gcccagacagaagaatatggcgacatgttctccttcggtgttatcgaccctgccaaagtg
tgccgtacagcactggaagacgctgcatccatcgctggtctgttgatcacaacagaagca
atggttgctgacaagccatccgaaggtggtgctgctggtggcggcatgcctgacatgggc
ggcatgggcggcatgggcggcatgatgtaa
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