Amylibacter sp. IMCC11727: QBD29_14775
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Entry
QBD29_14775 CDS
T08989
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl03030
DNA replication
amyl03430
Mismatch repair
amyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QBD29_14775 (dnaE)
03430 Mismatch repair
QBD29_14775 (dnaE)
03440 Homologous recombination
QBD29_14775 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyl03032
]
QBD29_14775 (dnaE)
03400 DNA repair and recombination proteins [BR:
amyl03400
]
QBD29_14775 (dnaE)
Enzymes [BR:
amyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QBD29_14775 (dnaE)
DNA replication proteins [BR:
amyl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QBD29_14775 (dnaE)
DNA repair and recombination proteins [BR:
amyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QBD29_14775 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
WGI21364
LinkDB
All DBs
Position
complement(2935830..2939339)
Genome browser
AA seq
1169 aa
AA seq
DB search
MSTQDRFIHLRLHTAYSLLEGAIQVKKLPDMCAQMGMPAVAVTDSGNLFSALEFSETAAK
AGVQPIVGCQMDLAYASAAQVGGKVPAPRAIVLLAQNEAGYLNLMKLNSCAFLDSGDQLP
HITLEELGKHSEGLICLTGGALGPIGQLVQDGQHEAAKALLMRMADMFADRLYVELQRHP
SEGTRGTPAEIATEQFFVETAYAMDLPLVATNDVFFPKTEMFEAHDALICIADGAYVDQQ
EPRRRLTPEHYFKTPKQMIELFADLPEAVENTIEIAQRCGFRATTRDPILPKFADDEVAE
LRRIANEGLQQRLAVIPHAVSVEEYQERLDFELGIIEGMGFPGYFLIVADFIQWGKDQGI
PVGPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIR
YVQEKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKLIPVEGVKPVSIEKA
LADEPRLREEAKSEEVVDRMLTYAQQVEGLLRNASTHAAGVVIGDRPLDELVPLYQDPRS
DMPATQFNMKWVEQAGLVKFDFLGLKTLTVIQNALDLINGAGRDLHIAPDGTQLYDPPEG
AVNEINAIPLDDAATYKLYADAKTVAVFQVESSGMMDALRRMKPDCIEDIIALVALYRPG
PMENIPKFCEVKNGQSERDKLHPTIDHILDETQGIIVYQEQVMQIAQEMAGYSLGGADLL
RRAMGKKIQEAMDAERPKFLEGAGKNGVDQKKAMEVWNLLDKFANYGFNKSHAAAYAVVS
YQTGWLKANHPVEFMAAVMNCDIHLTDKLGVFIEETKRKLEIEVVPPCVNQSLATFSVAG
DKIHYALGALKNVGGEAMKLIVDARTEGGTFSDLFDLARRVDLKRVGKRPMEMLARSGAF
DQLDGNRRKCLESVDALVAYSAATHEQKNSAQGGLFGDSGEDLPAPRLPMPEDWLPTERL
AMEHQAIGFYLSGHPLDDYLGPLKRKKVMTLAEVENKARSGAFAAKLAGTVSAKQERKSA
RGNRFAFVQCSDPTGLFECTVFSDTLEKFRDFLVPGTNVVLTVEATMEADQLKLLCRGAQ
LVDAAVADAAAMGLKVYIGEEDAIGSVATRLEEANKSGNARQRGPVHLVLMHPDLPGEVE
IALKQDYVLNPQIAGALKHVPGVQMVEEF
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcaagacagattcatccaccttcgccttcacactgcctattccttattggag
ggggccattcaggtgaagaaattgccagatatgtgcgcccaaatgggcatgcctgcggtg
gctgtgacggacagtggtaacctgttttcggcgctagagttttcggaaacagccgccaag
gctggggtgcagccgattgtgggctgtcagatggatttggcctatgccagtgccgcgcag
gtggggggcaaagtgcccgcgccgcgtgcgattgttttgctggcgcagaacgaagcgggg
tatctgaacctgatgaagctgaattcctgtgcgtttttggacagcggcgatcagttgccc
cacatcacgttggaggaattgggcaaacactcggaggggctgatctgtttgacaggcggc
gcgctcgggccgattgggcagttggtgcaggatggccagcacgaagccgcaaaggcgctg
ttgatgcgtatggcggatatgtttgcggatcggctgtatgtggaattgcagcgtcatccg
agtgaaggcacgcgcgggacacccgccgagattgcgacagaacagtttttcgtggaaacg
gcctatgcgatggatttgccactggtggcaaccaacgatgtgtttttccctaagaccgaa
atgttcgaggcccatgatgcgctgatttgtattgcggacggggcctatgtggatcagcaa
gagccgcgccgccgtttgacgccagagcattatttcaaaacaccaaagcagatgatcgag
ttgtttgccgatttgcccgaggcggtggaaaacacgattgagattgcgcagcggtgcggg
tttcgagccactacgcgcgatccaatcctgccaaagtttgcggatgacgaggtggctgaa
ctgcgccgcattgccaacgagggtttgcagcagcggttggcggttattccccatgcggtg
agtgtggaagaatatcaggagcgattggatttcgagctggggattatcgaggggatggga
ttccctgggtattttctgatcgttgcggatttcattcagtggggcaaggatcagggtatt
cctgtggggcccgggcgggggtctggtgcgggtagtcttgtggcctatgcgctaactatc
actgaccttgatcctttgcggtattccttgctgtttgagcggttcttgaaccctgaacgg
gtgtccatgcccgacttcgatatcgacttttgcatggaccgccgtgaagaagtgatccga
tatgtgcaggagaaatatggccgcgataaggtggggcagatcattacctttggtgcgctt
ttgtctaaggccgccgtgcgcgatatcgggcgggttttgcagatgccgtatgggcaggtg
gatcggctgtctaagctgatcccagtagagggtgtgaagcctgtgtccatcgaaaaagcg
ttggcggatgagccgcgtttgcgcgaagaggcgaagtccgaagaagttgtggatcggatg
ctgacctatgcgcagcaggtggagggattgttgcgcaacgcatccacccacgcggcgggg
gttgtgattggggatcgaccgctggatgaattggttcccctgtaccaagacccgcgttcg
gatatgccagcgacccagttcaatatgaaatgggtggaacaggcgggtttggtgaagttc
gacttcctcggcctgaaaacgctgacagttattcagaacgcgctcgatttgattaacggc
gctgggcgggatttgcatatcgcgcctgatgggacgcaattgtatgatccgccagagggt
gcggtgaacgagatcaacgccattccgctggatgatgcggcaacgtataagttgtacgca
gacgccaagacggtggcggtgtttcaggtggaatcgagcggcatgatggatgcgctgcgg
cggatgaagcccgactgtatcgaggatatcatcgcgctggtagcgttgtatcgcccgggc
ccgatggagaatattccaaagttctgtgaggtgaagaacggacagtcggaacgggataaa
ttgcacccgacgattgatcatattctggatgaaacacagggtattattgtttaccaagaa
caggttatgcagatcgcgcaggaaatggcgggatatagccttggtggggctgacctgttg
cgtcgtgcgatgggtaaaaagatccaagaggcgatggatgcggagcggccgaagtttttg
gaaggcgctggcaaaaatggtgtggatcagaaaaaggcgatggaggtttggaacctgttg
gacaaattcgccaactatgggttcaacaaatcccacgcggcggcctatgcggtggtgtcc
taccaaacggggtggttgaaagcgaaccatcctgtagagtttatggccgcggtgatgaac
tgtgatattcatctgactgacaagctgggcgtgtttatcgaagagaccaaacgcaagttg
gagatcgaggtcgtgccgccctgcgtgaaccaatcgctggcaacgttttcggtggcgggt
gacaagattcactatgcgctgggcgcgttgaaaaacgtgggcggcgaagcgatgaagctg
atcgtggatgcccgtacggagggtggcactttcagcgatctgttcgatctggcgcggcgc
gtggatttgaagcgggtcgggaaacgcccaatggaaatgctggcgcgatctggggcgttc
gatcagctggatggcaatcgacgcaagtgtttggaaagtgtggatgcgctggtggcctat
tccgcggcgacccatgagcagaaaaactcggcccaaggtgggctatttggcgacagtggg
gaagacttgcctgcgccacgattgccaatgccagaggattggttgcccacggaacggttg
gccatggagcatcaggcgattgggttttacctgtctgggcatcctttggatgattatttg
gggccgctgaagcgtaagaaagtgatgacgctggccgaggtggaaaacaaggcgcgctct
ggtgcgtttgcggcgaaattggcggggactgtttcggccaagcaggaacgcaaatcggcg
cggggcaatcgatttgcctttgtgcagtgttcggacccgacggggttgtttgaatgtacg
gtgttttccgacacgctcgaaaaatttcgcgattttctagtgccgggcacgaatgttgtg
ctgacggttgaagcgacgatggaggcggatcagctgaagttgttgtgtcgcggggcgcag
ttggtggatgcggccgtggccgatgcggcggccatggggttaaaggtttatattggcgaa
gaagacgcgattgggtctgtggccacgcggttggaagaggcgaataaatcgggcaatgcg
cggcaacggggccctgtgcatttggttctgatgcacccagatttgcccggcgaagtggag
atcgcgctgaagcaggattacgtgctgaacccgcagatcgcaggggcgttgaagcatgta
cccggtgttcagatggttgaggaattctga
DBGET
integrated database retrieval system
