Amylibacter sp. IMCC11727: QBD29_15705
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Entry
QBD29_15705 CDS
T08989
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
amyl
Amylibacter sp. IMCC11727
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyl03032
]
QBD29_15705 (ihfB)
03036 Chromosome and associated proteins [BR:
amyl03036
]
QBD29_15705 (ihfB)
03400 DNA repair and recombination proteins [BR:
amyl03400
]
QBD29_15705 (ihfB)
DNA replication proteins [BR:
amyl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QBD29_15705 (ihfB)
Chromosome and associated proteins [BR:
amyl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QBD29_15705 (ihfB)
DNA repair and recombination proteins [BR:
amyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QBD29_15705 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Multi_ubiq
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WGI21540
LinkDB
All DBs
Position
complement(3140523..3140804)
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AA seq
93 aa
AA seq
DB search
MIRSELVEKIAEANPHLYQRDVERIVSTVFNEIIEALANGDRVELRGFGAFSVKKRDARV
GRNPRTGETVQVDEKHVPFFKTGKLLRDRLNGS
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatacgttcggaactcgtggagaaaattgccgaagccaatccacacctgtatcagcgc
gatgtggagcgcattgtgtccactgtattcaacgaaattattgaagcacttgcgaatggt
gaccgcgtggaattgcgcggctttggtgcattttcagtgaaaaaacgtgatgcgcgggtt
gggcgcaatccacgcacgggtgaaactgtgcaggtggacgaaaagcatgtgccgtttttt
aaaacgggcaagctgttgcgggatcgtttaaacggcagctga
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