Amylibacter sp. IMCC11727: QBD29_16210
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Entry
QBD29_16210 CDS
T08989
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl00300
Lysine biosynthesis
amyl00470
D-Amino acid metabolism
amyl01100
Metabolic pathways
amyl01110
Biosynthesis of secondary metabolites
amyl01120
Microbial metabolism in diverse environments
amyl01230
Biosynthesis of amino acids
Module
amyl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QBD29_16210 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QBD29_16210 (lysA)
Enzymes [BR:
amyl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QBD29_16210 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WGI21635
LinkDB
All DBs
Position
complement(3241585..3242856)
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AA seq
423 aa
AA seq
DB search
MDHFLYRDGVLHAEDVSISEIAASVGTPFYVYSTATLQRHYTVFDDALAGMPHLVCYAMK
ANSNLAVLKLLADMGAGMDVVSVGEYMRAKAVGVPGDKIVFSGVGKTRAEMEHVLAGGIR
QFNVESEPELHLLSKVAAEMGVEVPITVRVNPDVDAKTHPKIATGMSDNKFGIPISRARD
VYALAASLPGIKVVGIDVHIGSQLVDLDPYRDAFLKVAELTEALRADGHEIKRLDLGGGL
GIPYERSNADPPLPSDYGDIVRETVGHLDCEIEIEPGRLIAGNAGLMVSSVIFNKSGDGR
DFLIVDAAMNDLIRPAMYDAHHDIVPVIEPAVGTTVAPIDIVGPVCESGDTFTKQRPMPP
VADGEMIAFRSAGAYGAVMSSEYNSRPMIPEVLVDGDQFAVIRPRPTFDEMLNRDKLPEW
MQD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttttgtaccgcgatggggtgttgcacgcagaagacgtgtcgatcagtgaa
attgccgccagcgttggcacgccgttttatgtgtattcgacggcgacattgcagcggcat
tataccgtgtttgatgacgctttggcggggatgccgcatttggtgtgttacgccatgaaa
gccaattcgaatttggctgttctaaagctgttggcggatatgggtgcgggcatggacgtg
gtgtctgtgggcgaatacatgcgcgccaaagccgtgggtgtgcctggcgacaagatcgtg
ttttcgggtgtggggaaaacgcgagccgagatggagcatgtgctggcgggtggcattcgt
cagttcaacgtggaaagcgagcctgagttgcatttgctgtcaaaagtggcggctgagatg
ggggttgaagtgccgattacggtgcgggtgaaccctgatgtggatgcgaagacccatccg
aagattgccacggggatgtcggacaacaaattcgggattccaatcagccgtgcgcgggat
gtgtatgcgttggcggcgtccttgccagggatcaaagtggttgggattgatgtgcatatc
ggtagccaactggtagatttggacccttaccgcgatgcgtttttgaaggtggcggaactg
accgaagcgttgcgggcagacgggcatgagatcaagcgactggatctggggggcggattg
ggcatcccttatgagcggagcaacgccgatcctccgcttccgtctgattacggagatatt
gtacgcgaaacagttgggcatctggactgtgagattgagattgaacctggccgtttgatc
gcggggaatgcgggtctgatggtgagttcagtgatctttaataaatcgggtgacgggcgc
gattttctgatcgtggatgcggcgatgaacgatctgatccgccccgctatgtatgacgcg
caccatgatattgtgcctgtgatcgagcctgcggtaggcacaacggttgcaccgattgat
atcgttggacccgtctgtgagagtggggataccttcaccaaacagcgcccgatgccgcct
gtggcagatggagagatgatcgcgtttcgatcagcgggggcttatggagcggtgatgtcg
tctgaatataattcgaggccgatgatccccgaagttttggtggatggggatcaatttgcc
gtcatcagaccccgcccgacatttgacgaaatgttaaatcgggataagctaccagagtgg
atgcaggactga
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