Amylibacter sp. IMCC11727: QBD29_17285
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Entry
QBD29_17285 CDS
T08989
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
amyl
Amylibacter sp. IMCC11727
Pathway
amyl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QBD29_17285 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyl03400
]
QBD29_17285 (mutM)
Enzymes [BR:
amyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QBD29_17285 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QBD29_17285 (mutM)
DNA repair and recombination proteins [BR:
amyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QBD29_17285 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WGI21839
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All DBs
Position
3450598..3451467
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AA seq
289 aa
AA seq
DB search
MPELPEVETVRRGLEPAMVGKRIAVADVRRPDLRWPFPERMAERLTGARIERLRRRSKYI
LGDLDTGETILIHLGMSGRMTIAAPTGDAKDMLGDFHHLHPAPEKHDHVVLDMEDGTRIT
FNDARRFGSMDMFATDTGETHKLLAVLGPEPMGNAFDEAYFKAALKGKNSPIKSVLLDQR
IVAGLGNIYVCEALWRTGISPLRKAGGLSAKRVASLVPAIRQVLGEAIESGGSSLKDYRQ
ADGELGYFQHSFAVYGREGEPCKTNGCAGTIRRAVQSGRSSFYCNDCQS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcccgaagttgaaaccgtccgccgtgggctggagcctgcgatggtgggc
aaacggattgcggttgcagacgtgcgccgacctgatctgcgttggccgtttcctgaacgt
atggcggagcggttgaccggtgcgcggatagagcggttgcggcggcggtcaaaatacatc
ctaggggatttggacacgggcgagacgattctgattcatctggggatgtcggggcgcatg
acgattgccgcgccaactggggatgccaaagatatgttgggggactttcatcatctgcat
cccgcgcccgaaaaacatgatcacgtggtgttggatatggaggacggcacgcgcattacg
tttaacgatgcgcggcggttcgggtcgatggatatgtttgccacggacacaggagagacg
cataagctgcttgcggtgctgggacctgagccgatggggaacgcatttgatgaggcgtat
ttcaaggcggcgctgaaggggaaaaattcaccgattaaatcggtattgctagatcaacgg
attgtggcggggttgggcaatatttacgtctgcgaggcgctgtggcgcacggggatatcg
ccgctgcgcaaagcaggcgggttaagtgccaaacgtgtggccagtttggtccctgcgatt
cgccaagttttgggggaagccatcgaatcggggggctcttcgttgaaagattatcgtcag
gccgatggggaactgggatattttcaacactctttcgctgtctatggacgcgagggagag
ccttgtaaaacaaacggttgtgcgggaaccatcagacgtgcggtgcaatctggccgatct
tcgttttactgtaacgattgtcagtcttag
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