Amycolatopsis cyclosori: AB5J62_10500
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Entry
AB5J62_10500 CDS
T11871
Name
(GenBank) hypothetical protein
Organism
amyo Amycolatopsis cyclosori
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLIPPER_2
CLIPPER
DUF7617
CARDB
NPCBM_assoc
TRAP_beta
DUF7927
Ig_TRAPPC9-Trs120_2nd
HYDIN_VesB_CFA65-like_Ig
Emfourin
DUF7933
DUF7974
Motif
Other DBs
NCBI-ProteinID:
XEM64712
LinkDB
All DBs
Position
complement(2282294..2288143)
Genome browser
AA seq
1949 aa
AA seq
DB search
MRNSFKPLRLFVALALLFTSAAIGAGPAAAGIVKQFTLDYNEVVYGDFLYAGNGVVRCPV
TADGAPTISGYTPVSCANSADRRDTQVNDNYFMQWSDVDSDAGTFDSSSAAVTIPPGAKI
TFARLNWAGNTGVYNYAPNVPLATKMCQDRLNRMPAVLPQGNPADQKVRLTVGADKAVDL
APTGYTEDPSNSYSGGQYYSAYADVTGQFAKAPTGSPLNLTVGNVWAPKGFNCMGGWSID
LVYAYPQRDPVYAPNKREVFIYNGHVRQNSSDPTTPTTITGFRAAAADAHVGVTAYEGDW
GIEGDQFLINDKPVAEPATGSTRNFFISNADNATAPSVKNNFSVDAKSFNVDTIAAGSTS
AKLGFATSGDAYLAQNLAFSTPVPELQITKRAEPTVVHAGDQVTFTIEVKNPSNAPASGV
RVADDAFPACAKVIGNLNGGQSTTYTCTATAPADDFTNTAKVTGTSALNEPLDGSSSVTV
DVVHPAIGITKKADKGGYRTGETVTFTVTVTNTGDVPLSSVAVADPKTPSCARTLATLDA
GKSSTFTCTTQAPVPDGVNTASVSGTDALGKRVDASADAPVPVIAPAITIEKSAGPEVIH
AGDAVTWTIKVTNTGDTPLQDIKVTDDKTTACSRAVTNLLPGGSESYTCTANPSQTTKNT
ATVTANDFFGGDPVTATDSATVTVLSPALSITKEASPRVVRAGDEVTFTLVVTNTGDVPL
TGVTVTDDRTPSCARTIGTLLPQQSQTHTCTAKAPDSGFTNTATATGKDPLAKEVKVTAD
ATIEVIHPSVSIVKDAAPAVVRSGDTVTYTITVTNTGDAALTDVTVADAQVPACAKTIGT
LQPRGTQTYTCMTVAGEQGFTNTAKVTGTDPTNRPVDATDDATFTVTHPAITLAKDVTGG
PFREGDTVPFQLTVTNTGDVPLTGVTVTDPLVTACARTYDGTLAPGATWTFGCTLVAGKD
DFTNVASVTGTPPVGPPVTATDDAPVDVIHPAVTITKDAAPTVVRAGDTVTFTITVTNTG
DTPLTAVSVADPIAPECTKTLGTLAPQAKQTYTCTLVAGNDDFANVASVTGTDPSNRPVT
ATDDAAVDVIHPAVSITKDAAPAAVREGDTVTFTLVVKNTGDVPLTAVSVVDSKTPSCAK
TFDVLAPDAAQTYQCTVVAGADGFTNTATVTGTDPTGRPVTATDDATFTVLHPGISITKD
VKGGPFRAGDTVTFSITVANTGDSPLTAVTVSDELAPSCAKTIDKLDPGASQTYECTMSA
PADDAVNVAKVTGTPPTGPPLTTSDDAKIDVIHPAVKITKEASPRTVRAGDDVTFTIVVT
NTGDVPLTNVSIVDSRTPTCAKTFARLEGVETYQCTTKAPEDDFTNTATVTGDDPTGRPV
TATDDAAVDVIHPAVTITKDAAPTQVREGDTVTFTLTVKNTGDVALAPVSIVDSQTPACA
RTIDSLAAGASQTYQCTVTAGAQGFTNTATVTGTDPLQRPVTATDDATFTVQRPGISITK
NTKGGPFRTGDSVTFEIVVTNTGDVPLTNVTVTDPLAPECARTFPTLPAAGVQRYPCTMT
APADDVTNTASVTGKPPVGPPVTATDDAPVDVIHPGIKLTKEAAPTQVRPGEQVTFTLTV
TNTGDVPLKSVSIVDDKTPACAFTIAVLAPGASQRHQCATNPASSLTNTATATGTDPTDR
PVTSTSTAEVTVIGPGISIEKTADAKPLLTGQQATFTIIVKNTGDVPLTDVTVTDPIAPA
CAITVGTLAPGASSKPITCMVTMPDHDLTNIATATGNDPTGRPVTSTDDATVKLAKPAVT
LTKKADATTTPGATVTFTLTVTNTGNVDLAPAKVTDPAYPQCDRAFDRLPAGSHQEWTCT
ATAPQSGDLTNTATVTGTPDTAQPADPVTDSATAVVKVNTPSTPDVTPPPSPPKPLATTG
FDPLPPSLLALALLSAGVLLVLHPTRRRR
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgcggaattcgttcaagccacttcgcctgttcgtggcgctcgcgctgcttttcaccagc
gcggcgatcggcgcgggaccggccgccgccgggatcgtgaagcaattcacgctcgactac
aacgaggtcgtgtacggcgatttcctgtacgcgggcaatggcgtcgtgcgctgccccgtc
acggccgacggcgcaccgaccatctccggctacacccccgtgtcctgcgcgaactcggcg
gaccgcagggacacccaggtcaacgacaattacttcatgcaatggtccgatgtggactcc
gacgcggggacattcgactcgtcgagcgccgcggtcaccattccgcccggcgcgaaaatc
accttcgctcggttgaactgggcgggtaacacgggcgtgtacaactacgcgccgaatgtt
cccttggcgacgaaaatgtgccaggaccggctcaaccggatgcccgcggtgctgccacag
ggaaatcccgccgaccaaaaggtccggctgaccgtcggcgctgacaaggccgtcgacctg
gcgccgaccggctacaccgaggacccgtcgaacagctacagcggcggccagtactactcg
gcctacgccgacgtcaccggccagttcgccaaggcgccgaccgggtcgccgctgaacctg
accgtcggcaacgtctgggcgcccaagggcttcaactgcatgggcggctggtccatcgac
ctcgtctacgcctacccgcagcgcgacccggtatacgcgccgaacaagcgcgaggtcttc
atctacaacgggcacgtccggcagaacagcagcgacccgacgacaccgacgacgatcacc
gggttccgcgccgcggcggccgacgcgcacgtcggcgtcaccgcctacgagggcgactgg
ggcatcgagggcgaccagttcctgatcaacgacaagccggtcgccgagcccgccaccggc
tcgaccaggaacttcttcatctccaacgccgacaacgcgaccgcgcccagcgtgaagaac
aacttcagcgtcgacgcgaagtcgttcaacgtcgacaccatcgcggcgggctcgaccagc
gccaagctgggcttcgcgacctccggcgacgcttatctcgcgcagaatctcgccttctcg
acgcccgtgccggagctgcagatcaccaagcgcgccgagccgaccgtggtgcacgcggga
gaccaggtcaccttcaccatcgaggtcaagaacccgagcaacgcgccggcgagcggggtg
cgcgtggccgacgacgccttcccagcctgcgccaaggtgatcggcaacctcaacggcggc
cagagcaccacctacacctgcaccgcgaccgcgccggccgacgacttcaccaacaccgcg
aaggtcaccggcaccagcgctttgaacgagccgctcgacggctcgtcgagcgtgacggtc
gacgtcgtgcacccggcgatcggcatcaccaagaaggccgacaagggcggctaccggacc
ggcgagaccgtcacgttcaccgtgaccgtgaccaacaccggtgacgtgccgctgagctcc
gtcgccgtggccgacccgaagacgccgtcctgcgcgcgcacgctggccacgctggacgcc
ggcaagtcgtcgaccttcacctgcaccacgcaggccccggtccccgacggcgtcaacacg
gcgagcgtgagcggcaccgacgcgctcggcaagcgggtcgacgcctccgccgacgcgccc
gttccggtgatcgcgcccgcgatcacgatcgagaagtcggccggcccggaggtcatccac
gcgggtgacgccgtcacctggacgatcaaggtgaccaacaccggcgacaccccgctgcag
gacatcaaggtcaccgacgacaagaccacggcctgctcgcgggccgtcacaaacctgctc
ccgggcggctcggaaagctacacctgcaccgcgaacccgtcgcagacgaccaagaacacg
gcgaccgtcaccgccaacgacttcttcggcggcgaccccgtgacggcgacggattcggcg
acggtgaccgtgctgagcccggcgctgagcatcaccaaggaggcctcgccgcgcgtggtc
cgcgccggcgacgaggtcacgttcaccctggtcgtgacgaacaccggcgacgtgccgctc
accggcgtcaccgtgacggacgaccgcacgccgtcctgcgcccgcacgatcggcacgctg
ctgccgcagcagtcgcagacgcacacctgcacggccaaggcacccgacagcggcttcacg
aacaccgcgaccgcgaccggcaaggacccgctggccaaggaggtcaaggtcacggccgac
gcgacgatcgaggtcatccatccgtcggtgagcatcgtgaaggacgccgcgcccgcggtc
gtccgctccggcgacacggtcacgtacacgatcaccgtgaccaacacgggcgacgccgcg
ctcaccgacgtgacggtcgcggacgcccaggttcccgcctgcgccaagacgatcggcacc
ctgcagccgcggggcacgcagacgtacacgtgcatgacggtggcaggcgagcaaggcttc
accaacaccgcgaaggtgaccgggaccgatccgacgaaccgcccggtcgacgccaccgac
gacgcgacgttcaccgtgacgcaccccgcgatcaccctcgccaaggacgtcaccggcggc
ccgttccgcgagggcgacaccgtgccgttccagctcacggtgaccaacaccggcgacgtg
ccgctgaccggcgtcacggtcacggacccactggtcacggcctgcgcgcggacatacgac
ggcacgctggcaccaggcgcgacctggaccttcggctgcaccctcgtggcgggcaaggac
gacttcaccaacgtcgcctcggtcaccggcacgccaccggtcgggccgccggtgacggcg
acggacgacgcaccggtcgacgtcatccacccggcggtcaccatcaccaaggacgcggcg
cccaccgtggtccgcgcgggcgacacggtcacgttcaccatcacggtgaccaacaccggc
gacaccccgctgaccgccgtctccgtcgccgacccgatcgcccccgagtgcaccaagaca
ctgggaacccttgccccgcaagcgaaacagacgtacacctgcacgctcgtcgcaggcaat
gacgacttcgcgaacgtcgcttcggtcaccggaaccgacccgtcgaaccgcccggtcacc
gcgaccgacgacgccgccgtcgacgtcatccacccggcggtgagcatcaccaaggacgcg
gcgcctgccgcggtccgtgaaggcgacacggtcaccttcaccttggtggtcaagaacacg
ggcgacgtgccgttgaccgcggtgtccgttgtggactcgaaaactccgtcctgcgccaag
actttcgacgttctcgcgccggacgccgcacagacctatcagtgcaccgtggtcgccgga
gccgacggcttcaccaacacggcgacagtcacgggcaccgacccgaccgggcgcccggtc
accgcgaccgacgacgccacgtttacggtgctgcatcccggaatctcgatcaccaaggac
gtcaagggcggcccgttccgcgccggcgacacggtcaccttcagcatcaccgtcgccaac
acgggcgactccccgctgaccgcggtcaccgtctccgacgaactcgccccgtcctgcgcc
aagacgatcgacaagctcgaccccggcgcgtcgcagacctacgaatgcacgatgagcgcg
cctgccgacgacgcggtgaacgtcgccaaggtcaccggcaccccgcccacgggaccgccg
ctgacaacctcggacgacgcgaaaatcgacgtcatccacccggccgtgaaaatcaccaag
gaggcctccccgcgcacggtccgcgcgggcgacgacgtcacgttcaccatcgtcgtgacc
aacaccggcgacgtgccactgaccaatgtctccattgtggactcacgaaccccaacctgc
gccaagaccttcgcgcgcctcgaaggcgtcgaaacctaccaatgcacgacgaaggcgccc
gaggacgacttcaccaacacggcgaccgtcaccggcgacgacccgaccggacgcccggtc
accgcgaccgacgacgccgcggtcgacgtcatccatcccgcggtgacgatcaccaaggac
gcggcgcccacccaggtccgtgagggcgacacggtcacgttcacgctgacagtcaagaac
accggcgacgtcgccctggctccggtatccattgtggactcgcaaaccccagcctgtgcc
cgcaccatcgactcactggcggcaggcgcgtcgcagacctaccaatgcacggtgaccgcg
ggagcgcaaggcttcacgaacacggcgacggtcaccggaaccgacccactccagcgcccg
gtcaccgcgacggacgacgcgacgttcacggtccagcgccccggcatctcgatcaccaag
aacaccaagggcggcccgttccgcaccggcgactcggtcaccttcgagatcgtggtcacc
aacaccggcgacgtgccgttgaccaacgtgacggtgaccgacccgctggctcccgaatgc
gcccgcacgttcccgacccttccggccgcgggcgtccagcgttacccctgcaccatgacc
gctcccgcggacgacgtgacgaacacggcttcggtcaccggcaaaccgccggtcggcccg
ccggtgacggcgacggacgacgcgcccgtcgacgtcatccaccccggcatcaagctcacg
aaggaggcggcccccacccaggtccgccccggcgagcaggtcaccttcaccctgacggtg
accaacaccggcgacgtgccgctcaagtcggtgtccattgtggacgacaagacacccgcc
tgcgccttcacgatcgcggtgctggcacccggcgcttctcagcgtcaccaatgcgccacc
aaccccgcgtccagcctcacgaacaccgcgacggcgacgggaaccgaccccaccgaccgg
ccggtgaccagcaccagcaccgccgaagtcaccgtcatcggccccggcatctccatcgag
aagacggccgacgccaagccgctcctcaccggccagcaggcgaccttcacgatcatcgtg
aagaacaccggcgacgtgccgttgaccgacgtgacggtgaccgaccccatcgcacccgcc
tgcgcgatcaccgtcggcaccctcgcgcccggcgcgtcgtccaagccgatcacctgcatg
gtcaccatgcccgaccacgacctcaccaacatcgcgacagcgacgggcaacgaccccacc
ggccgcccggtcacctcgaccgacgacgccacggtcaaactcgccaagcccgcggtcacg
ctgacgaagaaggccgacgcgaccaccacgcccggcgccacggtcaccttcaccctcacg
gtgaccaacacaggcaacgtcgacctggcccccgccaaggtcacggacccggcctacccc
cagtgcgaccgcgccttcgaccgcctcccggccggctcgcaccaggagtggacctgcacc
gccaccgcgccgcagtccggcgacctgacgaacaccgcgaccgtgaccggaacacccgac
accgcccagcctgccgacccggtcacggacagcgcgaccgccgtcgtcaaggtgaacacg
ccctccaccccggacgtgacacccccaccgtcacccccgaagcccttggccaccaccgga
ttcgacccgctaccgccgtccctgctcgccctagccctcctgtcagcaggcgtcctcctg
gtcctccacccgacccgccgccgacgctaa
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