Amycolatopsis cyclosori: AB5J62_21455
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Entry
AB5J62_21455 CDS
T11871
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
amyo Amycolatopsis cyclosori
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_11
AAA_30
Viral_helicase1
AAA_19
UvrD_C_2
NAT10_TcmA_helicase
PDDEXK_1
SLFN-g3_helicase
NPHP3_N
AAA_22
nSTAND3
IstB_IS21
AAA_16
MeaB
PIF1
Cas_Cas4
AAA_25
Mg_chelatase
MobB
ResIII
NACHT
TsaE
Motif
Other DBs
NCBI-ProteinID:
XEM66771
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All DBs
Position
4775599..4778952
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AA seq
1117 aa
AA seq
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MYTPSDLADLLECEHRSVLKQAFAAGLPGAPRPGSGADQLAVKHGRAHEVATLTRLRGEK
RVVIEIDERDPVVAARETAEALSAGAPVVYQAVFHDDDFSGRADFLMRDEHGRYEVYDTK
LARHAKPAAVVQLAAYADALRRAGWPAGPEMHLLLGDGSTRSLRVDDFLPLLNRLSARLK
GREPNLPEQLWAEERPACSGCSFADHCSSSREADRDLSLVAGMRGDQRRKLVAAGLGSID
ALAVAQPEDRPRDLSVTSFTTLRAQASIQVKQDATGEIAYEVIEPEALATLPPPQPGDVF
FDMEGDPYALAGQGLEYLFGAVTADGMQRFTPFWAHTRAQEKRAFEEFIDFTVARLAAHP
GSHVYHYAPYEVTAVKRLAAVHGTREEVVDQLLRSGAMVDLYAVVRKALRVSQRSYSIKY
LEPLYMPGARDGDVKTAVSSIEAYEEYLTLSHSGESERADEVLRGISDYNEYDCVSTLRL
FEFLHKVRAEAGIELIEPEPTDVIDDDVNADRRAERAARLAALVDPLLDGLPDDPAAFSP
DEHARALLAASVGYHRRETNPAWWEYFRQLAAPLGDLEVDTTCAVPVSVRSDAWVQPSGR
TKLAKRTLVLTCDPDRPHPFTPGDAVRLRYGTDARDAKVIASSAVELTLEESCPPEATSF
DRPMAVLPGSPVRPSPKDDAVAELARLAVDELPVLPRHAGIDLLKRTPPRLRGARPEAGE
DLVRTVIDTVDVLDGSVLAVQGPPGAGKTYLAGRLIAHLVRAGKTVAVTSTSHKAVENVL
SAALKTAPNLPCAKRPKKTPDPNALWDQPKTNPTLVKWRQEHDAGHLVGGTAWTFANTAI
RDEPFDLLIIDEAGQFALADALAVSLCAKNLLLLGDPQQLPQVVQGTHPAGAEASALGHL
IGEADIIPPELGYFLDETRRMHPAVCEPVSRLSYAGRLRAHPSAAERAVSGVGAGLYLSE
VDHHGNTTRSPEEAEEVVRIVAGLHGRTWTDHGTSRPLDDGDFLVVAPYNLQARVVTNAL
TQAGFPGVRVGTVDRFQGQEAPVVIATMTSSSAVDLPRGLDFLLSRNRLNVALSRAQALA
IMVCSPRLVEADIRTVDQMRLVSGMIGLMTEARLWSW
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccccttccgatctcgccgacctgctggaatgcgaacaccgcagtgtgctgaag
caggctttcgccgccggtctgccgggtgcgccccggcctggcagcggggccgaccagctc
gccgtcaaacacgggcgcgcgcacgaggtcgcgacactgacccggctgcgtggtgagaaa
cgcgtcgtcatcgagatcgacgaacgggacccggtcgtcgccgcgcgggagaccgccgaa
gcgctgagtgccggcgcgcccgtggtctaccaggccgttttccacgacgacgacttctcg
ggccgggccgacttcctcatgcgggacgagcacggccgctacgaggtctacgacaccaag
ctcgccaggcacgcgaagcccgccgcggtcgtccagctcgccgcgtacgccgacgcgttg
cggcgcgcgggatggcctgccgggcccgagatgcacctgctgctcggcgacgggagcacc
cggtcgctgcgcgtggacgacttcctgccgctgctgaaccggctgagcgcgcggcttaag
gggcgtgagccgaatctgcccgagcagctgtgggccgaagagcggcccgcgtgttcgggc
tgctcgttcgccgaccactgctcgagctcgcgcgaggcggaccgggacctttcactggtc
gcgggtatgcgcggggaccagcggcgcaagctcgtcgcggccgggctggggtcgatcgac
gcgctcgccgtcgcgcaaccggaagaccggccgcgcgacctttccgtcacgtcgttcacg
acgctgcgggcgcaggcgtcgatccaggtcaagcaggacgcgaccggcgagatcgcgtac
gaggtcatcgaaccggaggcgctcgcgacactgccgccgccgcagcccggcgacgtcttc
ttcgacatggaaggcgacccgtacgcgctggcggggcaggggctggagtacctgttcggc
gcggtgaccgccgacgggatgcagcggttcaccccgttctgggcgcacacccgcgcgcag
gagaagcgggcgttcgaggagttcatcgacttcacggtcgcgcggctcgccgctcatccg
gggtcgcacgtctaccactacgcgccgtacgaggtcacggctgtcaaacggctcgccgcg
gtgcacggcacgcgtgaggaagtggtcgaccagctgctgcgcagtggtgcgatggtcgac
ctgtacgccgtggtgcgtaaggctttgcgggtttcgcagcggtcgtattcgatcaagtac
ctcgaaccgctttacatgcctggcgcgcgtgacggcgacgtcaagaccgctgtctccagc
atcgaggcttatgaggagtacctgacgctttcgcacagcggcgaaagcgagcgcgccgac
gaggtgctgcgcgggatcagcgactacaacgagtacgactgcgtctcgacgctgcggctg
ttcgagttcctgcacaaggtgcgcgccgaggccgggatcgagctgatcgagccggagccg
acggacgtcatcgacgacgacgtcaacgccgaccgtcgcgccgagcgggccgcccggctg
gccgccttggtcgatcctctgctcgacgggctgcccgacgatcccgccgccttctccccc
gacgaacatgcccgcgcgctgctggccgcgtcggtcggctatcaccgccgggagacgaat
ccggcctggtgggagtacttccggcagctcgcggcgccgctcggcgacctcgaggtcgac
acgacctgcgcggttcccgtctcggtgcggtccgacgcgtgggtgcagccgagcgggcgg
acgaagctcgccaagcggacgctcgtgctcacctgcgacccggatcggccgcatccgttc
acccccggcgacgccgtccgcctgcgctacggcaccgacgcgcgcgacgcgaaggtcatc
gcctcgtccgcggtcgagctgacgctggaggagagctgcccgccggaggccacgtcgttc
gaccggccgatggcggtgctgcccggcagcccggtccggccgtcgcccaaggacgacgcc
gtcgccgaactcgccaggctcgccgtcgacgagttgccggtgctcccccgccacgccggg
atcgatctgctcaagcggacgccgccccggctgcgcggcgcgcggcccgaagccggtgaa
gacctggtccggacggtgatcgacaccgtcgatgtgctcgacggttcggtgctcgccgtg
cagggcccgcccggcgcgggcaagacctacctcgcgggcaggctgatcgcgcatctggtc
cgcgcgggcaagacggtcgcagtcacctcgaccagccacaaggcggtcgagaacgtgctg
tccgccgcgttgaagaccgcgccgaacctgccgtgcgcgaagcggcccaagaagacgccg
gacccgaacgcgttgtgggatcagccgaagaccaatccgacgctggtcaaatggcgtcag
gagcacgacgcggggcatctggtcggcgggaccgcgtggacgttcgccaacaccgcgatc
cgcgacgagccgttcgatctgctgatcatcgacgaggccgggcagttcgcgctggccgac
gcgctcgcggtgtccttgtgcgccaagaaccttctgctgctgggtgacccgcagcagctg
ccgcaggtggtgcagggcacgcacccggcgggcgcggaggcgtcggcgctggggcacctg
atcggcgaggccgacatcatcccgcccgagctgggttacttcctcgacgagacgcgccgg
atgcacccggcggtctgcgagcccgtgtcccggctgtcctacgccggacggctgcgcgcg
cacccgtccgcggccgagcgcgcggtcagcggtgtcggcgccgggctttatctgtccgaa
gtggaccatcacggcaacaccacccggtcaccggaggaggccgaggaggtcgtccggatc
gtcgccgggctgcacggcaggacgtggacagaccacgggacgtcgcggccgctcgacgac
ggcgacttcctcgtggtcgcgccgtacaacctgcaggcgcgggtggtgaccaacgcgctg
acgcaggccggtttccccggggtgcgggtcggcacggtcgaccggttccagggccaggag
gctccggtggtgatcgccaccatgacctcgtcgtcggccgtcgacctgccgcgcggcctg
gacttcctgctctcgcgcaaccggctcaacgtcgcgctctcgcgcgcgcaggcgctggcg
atcatggtctgctcgccccggctggtcgaggccgacatccgcacggtcgaccagatgcgg
ctggtgtccggcatgatcgggttgatgaccgaagccaggctatggtcgtggtga
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