Amycolatopsis cyclosori: AB5J62_37690
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Entry
AB5J62_37690 CDS
T11871
Name
(GenBank) hypothetical protein
Organism
amyo Amycolatopsis cyclosori
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
nSTAND1
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
CFAP251_N
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
DSE1_N
Ge1_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_NOL10_N
PAC11
ASA1
Beta-prop_SPT8
Tricorn_N
WD_LRWD1
Beta-prop_IFT140_1st
PD40
Tricorn_2nd
Beta-prop_HPS5
HTH_31
DUF7165
Beta-prop_DCAF4
Beta-prop_WDR41
nSTAND6
AAA_16
DUF7099
ABC_tran
DUF3040
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XEM61554
LinkDB
All DBs
Position
8321305..8325000
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AA seq
1231 aa
AA seq
DB search
MPRRERPLEPGDDAVVRFAASLRELRERAGGPTYRDLSKRAGYSAAALSDAAGGRKLPGL
ALTTAYVTACGGDLEHWEARWRAIAAELAASEEAVPAVPAETETPVPYLGLAAFQPDDAK
RFFGRERLVKELIGRLREHRFVGVFGASGSGKSSLLRAGLTGAVEHTALVVTPGARPLEQ
CEAGLAGRGGLLIVDQFEEVFTLCHDEAERTAFIDALLALAADEHGTTVVIGVRADFYGH
CGRHTGLVDALRDAQVLVGAMTGEELRAVIVEPAVLVGCRVETALVTRLVADAAGQPAAL
PLVSHALLETWRRRQGVTLTVAGYEAAGGIHDAIAHTAESVYKGLDQAGRELARQIFLRL
TTLDEGMADTKRRIGRRELDSAHADVVLDRLADARLLTLDRDGVEIAHEALIRCWPRLRE
WLDEDREGLRVHRQLTEATDTWEALGRDHSVLYRGTRLSAARDWSGKEQTLLTSRERDFL
DASLEAQAAETETGRRRTKRLRGLVALLAVLLLVAGITTVLAVRSDQTATGERNLALGRK
VVAQLETLRTTNPALAVQLSLAAYRLAPAQETRDALLSTFGAPYATRLTGHTGVVWALAY
SADGKRLASTGRDDGVRLWDMTGRPTELGLVAPPGVRATTVGISQDGATIAIGDSDDRVH
LWDVADPRRPAPLATFDLPVRGFEVSSIAFSGHTHLLAVGSWGNAVRLWDVLDPKRPREL
TTVTAHTDGVSSLAFSGDGTRLVTASIDHTVRLWDLTNPAAPAPEAVISDPDTRFRAVAF
SPDGRTVATGGLDQEPRLWDVTDRSKAVELAKLPAQPTPVYAVAFSPDGRTLAAAGPATA
TTLWDVTEPRRPKQTTTFGGHLDDVHGLAFSPDGRTLATGSADKTIRLEEVGGPASAMHA
DQAISLAYRPDGKVLATAGADRTLRLWDTADPRARPRLLAAIPAHRDRIWSVRFTPDGAM
AATSSDDFTTRLWDLRDPAAPKPLGTISAPGRPIYPSAFGPDGRTLYTSTIDGELKVWDL
ADPAAPALIGQVKNHTAQIAATVFDPAGTVMATAGFDATVRLWDVTDRSMPRQLAVSTES
GPLLAAAFSPDGHTLATAGADGKTRLWDVTGRALRPRATLGGHLSSANAVAFSPDGRLLA
TGSADKTVRLWNITDATGFAVLSGHTDAVAALAFAPDGHTLASTGFDRTIRLWDTSTDAV
AARICALAWPRLTRQEWDAYFPGVDFREPCP
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgccgagacgtgagcgtccgctggagccgggtgacgacgccgtcgtgcggttcgccgcg
agtctgcgtgagctccgtgagcgagcgggtggtcccacctaccgggacctcagcaagcgt
gccgggtactcggcggccgcgctctccgacgcggccggtgggcggaagctgccggggctc
gcgctgacgaccgcctacgtgaccgcctgcggtggcgacctcgaacactgggaagcgcgc
tggcgtgccatcgccgccgagctggccgcgagtgaagaggcggtgcccgccgtcccggcc
gaaaccgagacgccggtcccctatctcgggctcgccgcgttccagccggatgacgcgaaa
cggttcttcgggcgggaacggctggtcaaggagctgatcgggcggctgcgagagcatcgg
ttcgtcggtgtgttcggcgcttcgggctccggcaagtcgtcgctgctcagggccgggctg
accggcgcggtcgagcacacggcgctggtcgtgaccccgggcgcccgcccgctcgagcag
tgcgaggccgggctcgccggacgaggcgggctgctgatcgtcgaccagttcgaggaggtc
ttcacgctctgccatgacgaggccgagcgcaccgccttcatcgacgcgctgctcgcgctc
gccgccgacgagcacgggacgaccgtggtcatcggggtgcgtgccgacttctacggacac
tgcggccgccataccgggctggtcgacgcgctgcgcgacgcccaggtgctggtgggcgcg
atgaccggcgaagagctgcgcgcggtcatcgtcgaacccgcggtgctggtcgggtgccgg
gtggagaccgcgctggtcaccaggctggtggcggacgcggccggtcagcccgccgcgctg
ccgctggtgtcgcacgcgctgctggaaacctggcggaggcggcagggcgtcacgctcacc
gtcgccggctacgaggccgccggtggcatccacgacgcgatcgcgcacacggccgagtcg
gtctacaaaggactggatcaggccgggcgcgagctcgcgaggcagatcttcctgcggctg
accacgctcgacgagggcatggccgacacgaaacgccggatcggccgccgcgagctggac
tcggcacacgccgacgtcgtgctggacaggctggccgacgcgcggctgctcacgctggac
cgcgacggcgtcgagatcgcgcacgaagcgctgatccgctgctggccgaggctgcgggag
tggctcgacgaggaccgcgagggcctgcgcgtgcaccgtcaactcacggaggcgaccgat
acctgggaagcgctcggccgggaccacagtgttctctaccggggcacgaggctcagcgcc
gcgcgcgactggtccgggaaggaacagacattactgacgtcgcgggaacgcgacttcctc
gacgcgagtctcgaagcccaggcggcggagaccgagaccggcaggcgccggaccaagcgg
ttgcgtgggctggtcgcgctgctcgccgtgttgctgctggtcgcgggcatcaccacggtg
ctggccgtgcggtccgaccagaccgcgaccggggaacggaacctggcgctgggccggaag
gtggtcgcccagctcgaaaccctccgcacgacgaacccggcgctcgccgtgcagctcagc
ctcgccgcgtaccggctcgctccggcccaggaaacccgcgacgcgctgctcagcaccttc
ggcgcgccctacgccacccggctgaccgggcacaccggcgtggtgtgggcgctggcctac
agcgcggacggcaaacggctcgcctcgaccggccgggacgacggtgtccggctgtgggac
atgaccgggcggccgaccgaactcggcctggtcgcgccgccgggcgtccgggccacgacg
gtcgggatcagccaggacggggccacgatcgcgatcggcgacagcgacgatcgcgtccac
ctgtgggacgtggccgacccgcgcaggcccgcgccgctggcgaccttcgacctcccggtc
cgcgggttcgaggtcagctcgatcgcgttcagcggccacacccacctgctggccgtgggc
agctggggcaacgcggtccggctctgggacgtgctcgatccgaagcggccacgcgagctg
accacggtgaccgcgcacaccgacggcgtcagctcactcgcgttcagcggtgacgggacc
cggctcgtgacggcgagcatcgaccacacggtccggctctgggacctcacgaacccggcg
gcgcccgcgccggaagccgtgatcagcgatcccgacacccggttccgcgcggtcgcgttc
agccccgacggccggacggtcgccaccggcgggctggaccaggaaccgcggttgtgggac
gtgaccgatcggtcgaaagccgtcgagctcgcgaagctgcccgcgcagccgacgccggtc
tacgcggtggccttcagcccggatggccggacgctcgccgcggccgggcccgcgaccgcc
accacgctctgggacgtgaccgagccacgcagaccgaagcagacgacgaccttcggcggg
catctcgacgatgtgcacgggctggcgttcagtcccgacgggcgcaccctcgccaccggc
agcgccgacaagacgatccggctcgaagaggtcggtggacccgcttcggcgatgcacgcc
gatcaggccatttccctcgcgtaccggccggacggcaaggtgctcgcgaccgcgggcgcc
gaccggacgctccggctgtgggacaccgccgatccacgggccaggccccgtttgctggcg
gcgatccccgcgcaccgcgatcggatctggtcggtccgcttcaccccggacggcgccatg
gccgccacctcgagcgacgacttcaccacccggctgtgggacctgcgcgatcccgcggcg
ccgaagccgctcggcacgatttcggcgccaggccgcccgatatacccgtccgcgttcggg
ccggacggccgcacgctgtacacctcgacgatcgacggggagctcaaggtgtgggacctc
gccgatcccgccgcgcccgcactcatcgggcaggtgaagaaccacaccgcgcagatcgcc
gcgaccgtcttcgaccccgcgggcacggtgatggcgaccgccgggttcgatgccacggtc
cggctgtgggacgtcaccgatcgctccatgcccaggcagctggccgtcagcaccgaatcc
gggccgctgctcgcggccgcgttcagcccggacggccacacgctcgccaccgcgggcgcc
gacggcaagaccaggctgtgggacgtgaccggccgcgcgctgcggccgcgcgcgacactc
ggcggccatctcagttccgcgaacgcggtggcgttcagcccggacgggcggctgctggcc
accggcagcgccgacaagaccgtccggctgtggaacatcaccgacgccaccggtttcgcg
gtgctgagcggacacaccgacgcggtcgccgcgctcgcgttcgccccggacggccacacg
ctcgcctccaccgggttcgaccggacgatccgcctgtgggacacgagtaccgacgccgtg
gccgcccggatctgtgcgctcgcgtggccgcggctcacccggcaggagtgggacgcctac
ttccccggtgtcgatttccgggagccgtgcccatga
DBGET
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